New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 378772185 (0.850)2 (0.010) 2/192 35.5 0.01 coding (1283/1404 nt) RCAP_rcc00351 sensor histidine kinase
?NC_014034 1295961 = 201 (0.890)coding (203/471 nt) ureE urease accessory protein UreE
Rejected: Position hash score below cutoff.

GACACCGGGCCGGGCCTGCCCGCCAAGGCGCGCGAGCGGCTGTTCCAGCCCTTCTCGGGCGGGGTGAAGAAGGGCGGCACCGGGCTGGGTCTGGCGATTTCGGC....................................................................................................  >  NC_014034/378669‑378772
....................................................................................................CGGCTGATCGAGGTGCGCTGCGGGCTGGAACCGGTGCTGGTCGTGACCGGCGATCTGACCCGGCTGGCCTGGCATGTCGGCAACCGCCACACGCCCTGCCAGAT  >  NC_014034/1295961‑1296060
                                                                                                                                                                                                            
                                                 tCTTCTCGGGCGGGGTGAAGAAGGGCGGCACCGGGCTGGGTCTGGCGATTTCGGCTGATCGAGGTGCGCTGCGGGCTGGAACCGGTGCTGGTCGTGACCGG                                                        <  2:3338077/100‑1 (MQ=255)
                                                    TCTCGGGCGGGGTGAAGAAGGGCGGCACCGGGCTGGGTCTGGCGATTTCGGCTGATCGAGGTGCGCTGCGGGCTGGAACCGGTGCTGGTCGTGACCGGAGA                                                     >  1:3338314/1‑101 (MQ=255)
                                                                                                                                                                                                            
GACACCGGGCCGGGCCTGCCCGCCAAGGCGCGCGAGCGGCTGTTCCAGCCCTTCTCGGGCGGGGTGAAGAAGGGCGGCACCGGGCTGGGTCTGGCGATTTCGGC....................................................................................................  >  NC_014034/378669‑378772
....................................................................................................CGGCTGATCGAGGTGCGCTGCGGGCTGGAACCGGTGCTGGTCGTGACCGGCGATCTGACCCGGCTGGCCTGGCATGTCGGCAACCGCCACACGCCCTGCCAGAT  >  NC_014034/1295961‑1296060

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG