New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 408498 =10 (0.060)67 (0.410) 18/144 17.5 0.44 intergenic (+116/+32) glnA1/dapA glutamine synthetase/dihydrodipicolinate synthase
?NC_014034 = 1224268 163 (0.720)intergenic (‑140/+29) hisF/hisA imidazole glycerol phosphate synthase subunit HisF/1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
Rejected: Position hash score below cutoff.

Only 100 of 113 total aligned reads displayed.

TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC...................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGTGGCAAGATGAAGAGGCTTCG  <  NC_014034/1224268‑1224230
                                                                                                    ||||||||||||||||||||||||||||                                       
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                    >  1:1424793/1‑101 (MQ=1)
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                    <  2:2251152/101‑1 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                  <  1:4180142/101‑1 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                  <  2:416545/101‑1 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                  <  2:1192361/101‑1 (MQ=1)
   CCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTG                                                                 <  2:579091/101‑1 (MQ=1)
   CCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTG                                                                 <  2:1784365/101‑1 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                              >  2:4353930/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                              >  2:3593493/1‑101 (MQ=1)
         TGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCC                                                           <  1:3914530/101‑1 (MQ=1)
         TGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCC                                                           >  1:2963439/1‑101 (MQ=1)
          GACCGACGGGACCAAGGCCGCGTTTGACGCCGCGATGCACCACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                          <  2:1593269/101‑1 (MQ=0)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                          <  2:1663569/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                          <  2:1309499/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                          >  1:844390/1‑101 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                         <  2:1028513/101‑1 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                         >  1:3009335/1‑101 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                         >  1:1218501/1‑101 (MQ=1)
            CCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTC                                                        <  2:1005400/101‑1 (MQ=1)
            CCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTAGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTC                                                        <  1:1997140/101‑1 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                       <  1:2391717/101‑1 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                       <  2:752005/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      <  2:2420880/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      <  2:2649666/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      <  2:861214/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                      >  1:1961352/1‑101 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                     >  2:132404/1‑101 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                     <  2:4168829/101‑1 (MQ=1)
                  GGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTT                                                  <  2:501919/101‑1 (MQ=1)
                   GACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGTGGGCTCTGCCCCCCGTCTTGCTTT                                                 <  2:1106912/101‑1 (MQ=1)
                   GACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTT                                                 <  2:3639609/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                                <  1:3879124/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                                <  2:1496458/101‑1 (MQ=1)
                     CCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCA                                               <  2:3143880/101‑1 (MQ=1)
                     CCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCA                                               <  2:3861242/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                              <  1:3534749/101‑1 (MQ=1)
                       agGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                             <  1:3400553/99‑1 (MQ=1)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                            >  1:1554132/1‑101 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                           >  1:4433257/1‑101 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                           <  2:3198736/101‑1 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                           <  1:2454218/101‑1 (MQ=1)
                            CGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCC                                        <  1:3934848/101‑1 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGGCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGACTC                                      >  1:559268/1‑101 (MQ=0)
                               GCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                     <  2:1603751/101‑1 (MQ=1)
                               GCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                     <  2:1757440/101‑1 (MQ=1)
                               GCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                     <  2:3641000/101‑1 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCC                                    <  1:2578490/101‑1 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCC                                    <  2:2383846/101‑1 (MQ=1)
                                CTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGCGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAATCCTCCC                                    >  2:1718445/1‑101 (MQ=0)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                  >  1:2515490/1‑101 (MQ=1)
                                    cCGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTTGCGACCTGTGCGGGGGGCTCTTCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCG                                <  2:3477870/100‑1 (MQ=0)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCcgc                              >  1:4188926/1‑98 (MQ=1)
                                       CCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGA                             <  1:3538011/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                          >  2:4425720/1‑101 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  1:879041/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  1:607924/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                         <  1:2012001/101‑1 (MQ=1)
                                            gTGCCACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                        <  2:4305217/100‑1 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                       >  1:1210474/1‑101 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                       <  1:2223171/101‑1 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                       >  1:978520/1‑101 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                       <  2:1176575/101‑1 (MQ=1)
                                               CAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGcg                     <  2:4054662/101‑3 (MQ=31)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGCTATTTGAGG                    >  2:1983596/1‑101 (MQ=17)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGG                    <  1:312979/101‑1 (MQ=32)
                                                AACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGG                    <  2:2993629/101‑1 (MQ=32)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGC                   <  1:1654988/101‑1 (MQ=32)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGC                   <  1:3622370/101‑1 (MQ=32)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGC                   <  2:2995325/101‑1 (MQ=32)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                  <  1:1815177/101‑1 (MQ=32)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                  <  1:3501644/101‑1 (MQ=32)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                  <  1:1867594/101‑1 (MQ=32)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                  <  2:191748/101‑1 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG                <  2:4164361/101‑1 (MQ=32)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATG             >  2:4222030/1‑101 (MQ=14)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA            <  2:2837912/101‑1 (MQ=11)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA            >  2:1550886/1‑101 (MQ=11)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA            >  1:4154338/1‑101 (MQ=11)
                                                         GGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAA           >  2:1838755/1‑101 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGTCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          <  2:1988322/101‑1 (MQ=0)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          <  2:2111752/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          <  1:665178/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          <  1:1371001/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG          >  2:4414337/1‑101 (MQ=1)
                                                           cgGATCTGAGGTCGGTCCTTTTGGCGCCCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg         <  1:2383108/99‑2 (MQ=0)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCTACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg         <  2:301315/101‑2 (MQ=2)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg         <  1:2333565/101‑2 (MQ=11)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg         <  2:1853000/101‑2 (MQ=11)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGg         <  2:459350/101‑2 (MQ=1)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGga        >  1:1831113/1‑99 (MQ=1)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGga        <  2:129135/101‑3 (MQ=11)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGga        <  2:2849959/101‑3 (MQ=11)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgac       >  2:3783/1‑98 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgac       <  1:3186489/101‑4 (MQ=1)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgaca      <  1:3319484/101‑5 (MQ=11)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatc    <  1:3425982/101‑7 (MQ=17)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatc    <  1:2451723/101‑7 (MQ=17)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg   >  2:2251903/1‑94 (MQ=18)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcg   >  2:2041322/1‑94 (MQ=18)
                                                                  GAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGgacatcgg  >  2:3291327/1‑93 (MQ=21)
                                                                                                    ||||||||||||||||||||||||||||                                       
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC...................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGTGGCAAGATGAAGAGGCTTCG  <  NC_014034/1224268‑1224230

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG