New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 410002 =207 (0.960)2 (0.010) 2/190 35.3 0.01 coding (474/1959 nt) RCAP_rcc00380 transglycosylase, Slt family
?NC_014034 = 3092370 257 (1.140)coding (200/3093 nt) mdtF multidrug resistance protein MdtF
Rejected: Position hash score below cutoff.

GCCCGCGCCCGCGCCAGACGGCCCTGATCCAGCGCCGCCTGCATCCGCCCGCCGTGGAACGGCGCGACCAGATCGGCGTAACGGGCCAGAAACGCGGCCTGTTCC....................................................................................................  <  NC_014034/410106‑410002
....................................................................................................GTTCCCGCTCGATCGGGCGCACGACACTGTCATTCACCGTCTGCGCATCGGCCCCGGCATAAGTGGCAAAGATGCTGATCGAAGGCGGCGCCACCTCGGGGAAGC  <  NC_014034/3092370‑3092271
                                                                                                                                                                                                             
                                    GCCTGCATCCGCCCGCCGTGGAACGGCGCGACCAGATCGGCGTAACGGGCCAGAAACGCGGCCTGTTCCCGCTCGATCGGGCGCACGACACTGTCATTCAC                                                                      >  2:2129453/1‑101 (MQ=255)
                                                            GGCGCGACCAGATCGGCGTAACGGGCCAGAAACGCGGCCTGTTCCCGCTCGATCGGGCGCACGACACTGTCATTCACCGTCTGCGCATCGGCCCCGGCATA                                              <  1:2129592/101‑1 (MQ=255)
                                                                                                                                                                                                             
GCCCGCGCCCGCGCCAGACGGCCCTGATCCAGCGCCGCCTGCATCCGCCCGCCGTGGAACGGCGCGACCAGATCGGCGTAACGGGCCAGAAACGCGGCCTGTTCC....................................................................................................  <  NC_014034/410106‑410002
....................................................................................................GTTCCCGCTCGATCGGGCGCACGACACTGTCATTCACCGTCTGCGCATCGGCCCCGGCATAAGTGGCAAAGATGCTGATCGAAGGCGGCGCCACCTCGGGGAAGC  <  NC_014034/3092370‑3092271

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG