New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 419090 =212 (0.990)2 (0.010) 2/190 35.3 0.01 coding (1123/2220 nt) RCAP_rcc00388 OmpA/MotB domain‑containing protein
?NC_014034 = 1692287 202 (0.890)coding (644/657 nt) RCAP_rcc01561 Crp/Fnr family transcriptional regulator
Rejected: Position hash score below cutoff.

GCGCAAGGGCCAGCCCTCGGGCAGGCCGGTATCGACCCGCGTCGCGCCGTAAACCGAGGTCGCGCCGAATTGCGCATGGGCGAAACTTTCCAGCGCCTCGCGCGA....................................................................................................  <  NC_014034/419194‑419090
....................................................................................................CGCGACCGAGGCTTTGTGACGAGGTCACCGACACCGGCACAGCCGCCCTGCTAAGGTCAGCCATCGGCCGGAGACCCGGCCTTCTGACACCAAGGGAGCAAGAGA  <  NC_014034/1692287‑1692188
                                                                                                                                                                                                             
                                                      CGAGGTCGCGCCGAATTGCGCATGGGCGAAACTTTCCAGCGCCTCGCGCGACCGAGGCTTTGTGACGAGGTCACCGACACCGGCACAGCCGCCCTGCTAAG                                                    >  1:13268/1‑101 (MQ=255)
                                                      CGAGGTCGCGCCGAATTGCGCATGGGCGAAACTTTCCAGCGCCTCGCGCGACCGAGGCTTTGTGACGAGGTCACCGACACCGGCACAGCCGCCCTGCTAAG                                                    <  2:13256/101‑1 (MQ=255)
                                                                                                                                                                                                             
GCGCAAGGGCCAGCCCTCGGGCAGGCCGGTATCGACCCGCGTCGCGCCGTAAACCGAGGTCGCGCCGAATTGCGCATGGGCGAAACTTTCCAGCGCCTCGCGCGA....................................................................................................  <  NC_014034/419194‑419090
....................................................................................................CGCGACCGAGGCTTTGTGACGAGGTCACCGACACCGGCACAGCCGCCCTGCTAAGGTCAGCCATCGGCCGGAGACCCGGCCTTCTGACACCAAGGGAGCAAGAGA  <  NC_014034/1692287‑1692188

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG