New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 432407 =127 (0.770)73 (0.440) 28/146 12.9 0.48 intergenic (+10/+138) RCAP_rcc00403/RCAP_rcc00404 hypothetical protein/Sua5/YciO/YrdC/YwlC family protein
?NC_014034 = 1255865 32 (0.140)intergenic (+35/+207) RCAP_rcc01184/RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer
Rejected: Position hash score below cutoff.

Only 100 of 119 total aligned reads displayed.

GAGTCCGCAGACGGGGGGCAGCGCCCCCC...............................................................................................................................  <  NC_014034/432435‑432407
........................................................CCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTCT  <  NC_014034/1255865‑1255766
                             |||||||||||||||||||||||||||                                                                                                    
tcccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTC                                                         >  1:638512/10‑101 (MQ=1)
tcccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTC                                                         >  2:3924781/10‑101 (MQ=1)
 cccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCG                                                        <  2:485096/93‑1 (MQ=1)
 cccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCG                                                        >  2:2095444/9‑101 (MQ=1)
 cccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCG                                                        <  1:3692077/93‑1 (MQ=1)
 cccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCG                                                        >  1:4362074/9‑101 (MQ=1)
 cccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCG                                                        >  2:3833551/9‑101 (MQ=1)
  ccgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGA                                                       <  2:3542808/94‑1 (MQ=1)
   cgcaggggCGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGAC                                                      <  2:2107454/93‑1 (MQ=1)
   cgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGTCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGAC                                                      <  1:1322413/95‑1 (MQ=1)
   cgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGAC                                                      >  1:3637810/7‑101 (MQ=1)
   cgcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGAC                                                      <  2:2335076/95‑1 (MQ=1)
    gcaggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACA                                                     <  2:2216433/96‑1 (MQ=1)
      agggcCGGGGGGCAGCCCCCCCCCTCTGCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGG                                                   <  1:826290/96‑1 (MQ=0)
      aggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGG                                                   >  1:1618793/4‑101 (MQ=1)
      aggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGG                                                   <  1:2095581/98‑1 (MQ=1)
      aggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGG                                                   >  2:3531921/4‑101 (MQ=1)
      aggGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGCTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACCGG                                                   >  2:3507127/4‑101 (MQ=0)
        gGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAA                                                 <  2:964146/100‑1 (MQ=1)
        gGACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGCCAGAGTTTCGACAGGAg                                                 >  2:494724/2‑100 (MQ=1)
         GACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAG                                                <  1:702763/101‑1 (MQ=1)
         GACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAG                                                <  1:3496864/101‑1 (MQ=1)
          ACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGT                                               <  1:3934407/101‑1 (MQ=1)
          ACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGT                                               >  1:3342418/1‑101 (MQ=1)
          ACGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGT                                               >  2:3748421/1‑101 (MQ=1)
           gGGGGGGCCGCCCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTC                                              <  1:1426699/100‑1 (MQ=0)
           gGGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTC                                              <  1:2351587/100‑1 (MQ=1)
            GGGGGGCGCCCCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCG                                             <  2:3982295/101‑1 (MQ=0)
            GGGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCG                                             >  2:2997192/1‑101 (MQ=1)
             GGGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGT                                            <  2:3062607/101‑1 (MQ=1)
              gatctAGCGCCCCCCCTCTACGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTC                                           <  2:881038/96‑1 (MQ=0)
              GGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAATTCGTC                                           <  2:1981089/101‑1 (MQ=1)
              GGGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTC                                           >  1:864945/1‑101 (MQ=1)
               GGGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCG                                          <  1:394430/101‑1 (MQ=1)
                GGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGA                                         <  2:2150188/101‑1 (MQ=1)
                GGCAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGA                                         >  2:1466701/1‑101 (MQ=1)
                  CAGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACT                                       <  1:3882123/101‑1 (MQ=1)
                   AGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTGGTCagatg                                      >  1:881123/1‑96 (MQ=0)
                   AGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTT                                      <  2:2737685/101‑1 (MQ=1)
                   AGCGCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTT                                      >  2:1861727/1‑101 (MQ=1)
                    gccCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTC                                     <  1:757970/98‑1 (MQ=1)
                    GCGCCCCCCCTCTTCGGGCGGAGCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTC                                     <  2:187901/101‑1 (MQ=1)
                      cCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCT                                   <  2:4427589/100‑1 (MQ=1)
                      GCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCT                                   >  2:2499847/1‑101 (MQ=1)
                      GCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCT                                   >  1:1553248/1‑101 (MQ=1)
                      GCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCT                                   <  2:638444/101‑1 (MQ=1)
                      GCCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCT                                   <  2:630571/101‑1 (MQ=1)
                       CCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTT                                  <  1:3745402/101‑1 (MQ=1)
                       CCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTT                                  >  2:4196118/1‑101 (MQ=1)
                       CCCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTT                                  <  1:2744945/101‑1 (MQ=1)
                        CCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTC                                 <  2:2508018/101‑1 (MQ=1)
                        CCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTC                                 >  1:1138366/1‑101 (MQ=1)
                        CCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTC                                 >  1:3493453/1‑101 (MQ=1)
                        CCCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTC                                 <  2:3744508/101‑1 (MQ=1)
                         CCCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCT                                >  1:3741966/1‑101 (MQ=1)
                          CCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTT                               <  1:1861851/101‑1 (MQ=1)
                          CCCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTT                               <  1:1365122/101‑1 (MQ=1)
                           CCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTC                              >  1:911640/1‑101 (MQ=1)
                           CCCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTC                              >  2:4119752/1‑101 (MQ=1)
                            CCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCG                             <  1:2098751/101‑1 (MQ=1)
                            CCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCG                             >  1:2057921/1‑101 (MQ=1)
                            CCTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCG                             >  2:3692277/1‑101 (MQ=1)
                             CTCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGC                            >  1:154425/1‑101 (MQ=1)
                              gCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCC                           <  1:911175/100‑1 (MQ=1)
                              TCTTCGGGCGGACCGAAAGCGGGGGCTCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCC                           <  1:2691609/101‑1 (MQ=1)
                              TCTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCC                           >  1:258590/1‑101 (MQ=1)
                               CTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCG                          <  1:2927851/101‑1 (MQ=1)
                               CTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCG                          <  2:1111014/101‑1 (MQ=1)
                               CTTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCACCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCG                          <  1:3833804/101‑1 (MQ=1)
                                TTCGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGC                         >  1:2473448/1‑101 (MQ=1)
                                  CGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCT                       <  2:2340649/101‑1 (MQ=1)
                                  CGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCT                       >  2:3365249/1‑101 (MQ=1)
                                  CGGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCT                       >  2:3746685/1‑101 (MQ=1)
                                   GGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTC                      <  2:2538695/101‑1 (MQ=1)
                                   GGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTC                      >  1:1976972/1‑101 (MQ=1)
                                   GGGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTC                      <  2:3354005/101‑1 (MQ=1)
                                    GGCGGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCC                     >  2:1011033/1‑101 (MQ=1)
                                     GCGGACCGAAAGCGGGGGCCTGAAGGCCCCCGGTGCCGGTCCGGCGCCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCT                    <  2:3013197/101‑1 (MQ=0)
                                       GGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTG                  >  1:3522712/1‑101 (MQ=1)
                                       GGACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTG                  >  2:3616586/1‑101 (MQ=1)
                                        GACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGG                 >  1:1009280/1‑101 (MQ=1)
                                         ACCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGT                <  2:3484706/101‑1 (MQ=1)
                                          CCGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTG               <  1:1596612/101‑1 (MQ=1)
                                           CGAAAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGC              >  2:4323653/1‑101 (MQ=1)
                                              AAGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGC           >  1:2720902/1‑101 (MQ=1)
                                               AGCGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCC          <  2:1391714/101‑1 (MQ=1)
                                                 CGGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGT        <  2:1513384/101‑1 (MQ=1)
                                                  GGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTA       >  2:1020956/1‑101 (MQ=1)
                                                  GGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTA       >  1:3979336/1‑101 (MQ=1)
                                                  GGGGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTA       >  1:583830/1‑101 (MQ=1)
                                                    GGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATT     <  2:852491/101‑1 (MQ=1)
                                                    GGGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATT     <  2:939213/101‑1 (MQ=1)
                                                     GGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTT    >  2:1882665/1‑101 (MQ=1)
                                                     GGCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTT    <  1:1204513/101‑1 (MQ=1)
                                                      GCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTC   <  2:4131933/101‑1 (MQ=1)
                                                      GCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTC   <  1:413155/101‑1 (MQ=1)
                                                      GCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTC   <  1:173485/101‑1 (MQ=1)
                                                      GCCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGCCAGAGTTGCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTC   >  2:2708978/1‑101 (MQ=0)
                                                       CCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTCT  <  1:3746479/101‑1 (MQ=1)
                                                       CCCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTCT  >  2:910601/1‑101 (MQ=1)
                             |||||||||||||||||||||||||||                                                                                                    
GAGTCCGCAGACGGGGGGCAGCGCCCCCC...............................................................................................................................  <  NC_014034/432435‑432407
........................................................CCGAAGGCCCCCGGTTCCGGTCCGGCACCCCTAGGTCAGAGTTTCGACAGGAAGTCGTCGACTTCCTTCTTCGCCGCCTCCTTGGTGCGGCCGTATTTCT  <  NC_014034/1255865‑1255766

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG