New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 464152 =212 (1.000)2 (0.010) 2/188 35.1 0.01 coding (1006/1113 nt) RCAP_rcc00433 RND family efflux transporter subunit MFP
?NC_014034 3298717 = 188 (0.830)coding (323/990 nt) RCAP_rcc03103 hypothetical protein
Rejected: Position hash score below cutoff.

CGCGAGGAAAAGGCCGAAGGATCGGACACGGCCGAGCTGCATGCCCGGCAGGTCTTCATCAAGGTCGGCCGCCATTTCGACGACAAGGTCGAGATCCGCACCGGGC....................................................................................................  <  NC_014034/464257‑464152
....................................................................................................CCGGGCGGCTGGGGGAACTCGTGCGGATGCGCTGGCTGCGGCGCGAGACCGGCTGGACGCTGGAACGCACGGCGCCGCTGGCCCTGATGGACCGGGCAGGCGATCT  >  NC_014034/3298717‑3298816
                                                                                                                                                                                                              
                                                CAGGTCTTCATCAAGGTCGGCCGCCATTTCGACGACAAGGTCGAGATCCGCACCGGGCGGCTGGGGGAACTCGTGCGGATGCGCTGGCTGCGGCGCGAGAC                                                           >  1:4432271/1‑101 (MQ=255)
                                                   GTCTTCATCAAGGTCGGCCGCCATTTCGACGACAAGGTCGAGATCCGCACCGGGCGGCTGGGGGAACTCGTGCGGATGCGCTGGCTGCGGCGCGAGACCGG                                                        <  2:4431999/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGCGAGGAAAAGGCCGAAGGATCGGACACGGCCGAGCTGCATGCCCGGCAGGTCTTCATCAAGGTCGGCCGCCATTTCGACGACAAGGTCGAGATCCGCACCGGGC....................................................................................................  <  NC_014034/464257‑464152
....................................................................................................CCGGGCGGCTGGGGGAACTCGTGCGGATGCGCTGGCTGCGGCGCGAGACCGGCTGGACGCTGGAACGCACGGCGCCGCTGGCCCTGATGGACCGGGCAGGCGATCT  >  NC_014034/3298717‑3298816

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG