New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 470772150 (0.720)2 (0.010) 2/184 34.7 0.01 coding (491/1377 nt) zraR transcriptional regulatory protein ZraR
?NC_014034 2112813 = 195 (0.860)coding (543/726 nt) RCAP_rcc01949 undecaprenyl‑phosphate galactosephosphotransferase
Rejected: Position hash score below cutoff.

TGAACGGCCCCTGCGCGCGGGCCGAAAGCCGGTGGATCGCCAGCGCCGCCAGCTCCTTGCCGGTGCCGCTTTCGCCGCAGATGCAGACCGGCGCCATCGAGCGGGCGG....................................................................................................  >  NC_014034/470665‑470772
....................................................................................................GCGGGCGGGCGGGCCTATTTCCGGATGCGTCCGGGCGTGACCGGGCTGTGGCAGGTCGTCAGCCGTCACGACACCACGCTGGCCGCCCGGGTGCAGTTCGACGAAAGC  >  NC_014034/2112813‑2112912
                                                                                                                                                                                                                
                                                            CGGTGCCGCTTTCGCCGCAGATGCAGACCGGCGCCATCGAGCGGGCGGGCGGGCCTATTTCCGGATGCGTCCGGGCGTGACCGGGCTGTGGCAGGGCGTCA                                                 >  1:2718063/1‑101 (MQ=255)
                                                                 CCGCTTTCGCCGCAGATGCAGACCGGCGCCATCGAGCGGGCGGGCGGGCCTATTTCCGGATGCGTCCGGGCGTGACCGGGCTGTGGCAGGTCGTCAGCCGT                                            <  2:2717873/101‑1 (MQ=255)
                                                                                                                                                                                                                
TGAACGGCCCCTGCGCGCGGGCCGAAAGCCGGTGGATCGCCAGCGCCGCCAGCTCCTTGCCGGTGCCGCTTTCGCCGCAGATGCAGACCGGCGCCATCGAGCGGGCGG....................................................................................................  >  NC_014034/470665‑470772
....................................................................................................GCGGGCGGGCGGGCCTATTTCCGGATGCGTCCGGGCGTGACCGGGCTGTGGCAGGTCGTCAGCCGTCACGACACCACGCTGGCCGCCCGGGTGCAGTTCGACGAAAGC  >  NC_014034/2112813‑2112912

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG