New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 500880218 (1.040)2 (0.010) 2/186 34.9 0.01 coding (2283/2763 nt) glnD PII uridylyl‑transferase
?NC_014034 = 2705340 229 (1.010)coding (531/2049 nt) RCAP_rcc02519 diguanylate cyclase/phosphodiesterase
Rejected: Position hash score below cutoff.

CCATGACGCCACCCGGGCGGCCTTTGCGCTGTCCGATCACCCGGGGATCTTTTCGCGGCTGGCGGGGGCCCTGGCGCTGGTCGGCGCGAATGTGGTCGATGCCCGC....................................................................................................  >  NC_014034/500775‑500880
...................................................................................................TGCCCGCGACCCCCGGCCTGACGCTGGAGCAGCTGCTGGCGCGCTTCGTTTCCGACAAGGCGCGGGCGGCGATCCGGGACGATCTGGCGCAGCTTGTGCGCACGCAG  <  NC_014034/2705340‑2705241
                                                                                                                                                                                                              
                                                                             TGGTCGGCGCGAATGTGGTCGATGCCCGCGACCCCCGGCCTGACGCTGGAGCAGCTGCTGGCGCGCTTCGTTTCCGACAAGGCGCGGGCGGCGATCCGGGA                              >  2:3862599/1‑101 (MQ=255)
                                                                              GGTCGGCGCGAATGTGGTCGATGCCCGCGACCCCCGGCCTGACGCTGGAGCAGCTGCTGGCGCGCTTCGTTTCCGACAAGGCGCGGGCGGCGATCCGGGAC                             <  1:3862852/101‑1 (MQ=255)
                                                                                                                                                                                                              
CCATGACGCCACCCGGGCGGCCTTTGCGCTGTCCGATCACCCGGGGATCTTTTCGCGGCTGGCGGGGGCCCTGGCGCTGGTCGGCGCGAATGTGGTCGATGCCCGC....................................................................................................  >  NC_014034/500775‑500880
...................................................................................................TGCCCGCGACCCCCGGCCTGACGCTGGAGCAGCTGCTGGCGCGCTTCGTTTCCGACAAGGCGCGGGCGGCGATCCGGGACGATCTGGCGCAGCTTGTGCGCACGCAG  <  NC_014034/2705340‑2705241

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG