New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_014034 | = 510081 | 77 (0.350) | 16 (0.070) | 12/192 | 26.5 | 0.29 | intergenic (+68/+119) | RCAP_rcc00475/RCAP_rcc00476 | acyl‑CoA dehydrogenase domain‑containing protein/hypothetical protein |
? | NC_014034 | = 974303 | 1 (0.000) | intergenic (+183/+76) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein | |||||
Rejected: Position hash score below cutoff. |
CGACCCGCCGGGGGCTCCGCCCCCGGACCCCC.................................................................................................... > NC_014034/510050‑510081
............................CCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCA.CGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACGCTGGGGGGTCCGGG < NC_014034/974303‑974205
cgcCCCGCCGGGGGCTCCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTT < 1:2807701/98‑1 (MQ=0)
cCCCGCCGGGGGCTCCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTT < 2:401383/100‑1 (MQ=0)
cCCCGCCGGGGGCTCCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGACGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTT < 1:3600549/100‑1 (MQ=0)
CCGCCGGGGGCTCCGCCCCCGGCCCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTat < 1:1719805/101‑3 (MQ=0)
CGCCGGGGGCTCCGCCCCCGGACCCCCGGGATTTTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTT < 1:1787265/101‑1 (MQ=0)
CCGGGGGCTCCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGG < 2:3871155/101‑1 (MQ=0)
GGGGCTCCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGC < 2:698806/101‑1 (MQ=0)
GGGCTCCGCCCCCGGACCCCCGGAATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCA < 2:3255890/101‑1 (MQ=0)
GGCTCCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAA < 1:4143133/101‑1 (MQ=0)
CCGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATAC < 1:2280287/101‑1 (MQ=0)
CGCCCCCGGACCCCCGGTATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACG < 2:3470574/101‑1 (MQ=0)
CGCCCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACG < 1:1697544/101‑1 (MQ=0)
CCCCGGACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACGCTG < 1:1934919/101‑1 (MQ=0)
gcCCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACGCTGGGGGG < 2:2655610/99‑1 (MQ=0)
GACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACGCTGGGGGG > 1:2350016/1‑101 (MQ=0)
GACCCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCAGCGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACGCTGGGGGG > 1:2907924/1‑101 (MQ=0)
CGACCCGCCGGGGGCTCCGCCCCCGGACCCCC.................................................................................................... > NC_014034/510050‑510081
............................CCCCGGGATATTTGTCGCAAGGTGAAAACAAGCCGCTGCGCA.CGGCCATGCCGGATCCCGCCCGTCTGCTTTTTCTTGGTGCAAATACGCTGGGGGGTCCGGG < NC_014034/974303‑974205
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 8 ≤
ATCG
< 20 ≤
ATCG
< 31 ≤
ATCG
< 41 ≤
ATCG
|