New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 52766 =222 (1.080)2 (0.010) 2/182 34.5 0.01 coding (1373/1395 nt) regB sensor histidine kinase RegB
?NC_014034 914200 = 188 (0.830)coding (831/1650 nt) recN DNA repair protein RecN
Rejected: Position hash score below cutoff.

CGAGCCCTATCAGAAGAATGCGCCGGTGCCGCGGCGCTCGGGCGCGGTGGTCGAGCTGCGCTGGCACATCGGCCGTCTGATCGCCCCCGAAACCGGGCCGCTGGGCGA....................................................................................................  <  NC_014034/52873‑52766
...................................................................................................GCTGGGCGAAGCGGTCTCGGGGATCGAGGCGGCGCTGCAGGCGATGGCCTTCGATCCGCGCGCGCTGGAGGCCTGCGAGGAGCGGCTTTTCGCGCTGCGGGCGGCGGCG  >  NC_014034/914200‑914299
                                                                                                                                                                                                                
                                                                         atctTGATCGCCCCCGAAACCGGGCCGCTGGGCGAAGCGGTCTCGGGGATCGAGGCGGCGCTGCAGGCGATGGCCTTCGATCCGCGCGCGCTGGAGGCCTG                                    <  2:1224450/97‑1 (MQ=255)
                                                                             TGATCGCCCCCGAAACCGGGCCGCTGGGCGAAGCGGTCTCGGGGATCGAGGCGGCGCTGCAGGCGATGGCCTTCGATCCGCGCGCGCTGGAGGCCTGAGAt                                >  1:1224543/1‑100 (MQ=255)
                                                                                                                                                                                                                
CGAGCCCTATCAGAAGAATGCGCCGGTGCCGCGGCGCTCGGGCGCGGTGGTCGAGCTGCGCTGGCACATCGGCCGTCTGATCGCCCCCGAAACCGGGCCGCTGGGCGA....................................................................................................  <  NC_014034/52873‑52766
...................................................................................................GCTGGGCGAAGCGGTCTCGGGGATCGAGGCGGCGCTGCAGGCGATGGCCTTCGATCCGCGCGCGCTGGAGGCCTGCGAGGAGCGGCTTTTCGCGCTGCGGGCGGCGGCG  >  NC_014034/914200‑914299

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG