New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 553345 =182 (0.880)2 (0.010) 2/182 34.5 0.01 coding (395/1212 nt) fadA fatty acid oxidation complex subunit beta
?NC_014034 = 921130 196 (0.870)coding (428/1800 nt) pepP aminopeptidase P
Rejected: Position hash score below cutoff.

GCATCGGCCATCTCGCGGGTAAACCCGTATTCGGTGGCGATGATATCGGCGGAAATCCCCTGCGGCACGAAATAGGTCTTCATCGCAAGCGACGGATCGACGGCGATCG....................................................................................................  <  NC_014034/553453‑553345
....................................................................................................CGGCGATCGAACTGGTCGAGACGGCGAACCTGATCGACGCGATCTGGACCGACCGCCCGGCCCCGCCGACCGCAACCGCGCGGGTGCATCCGCTTGACTTCGCGGGGGA  <  NC_014034/921130‑921031
                                                                                                                                                                                                                 
                                   GGCGATGATATCGGCGGAAATCCCCTGCGGCACGAAATAGGTCTTCATCGCAAGCGACGGATCGACGGCGATCGAACTGGTCGAGACGGCGAACCTGATCG                                                                           >  2:3514595/1‑101 (MQ=255)
                                                                         AGGTCTTCATCGCAAGCGACGGATCGACGGCGATCGAACTGGTCGAGACGGCGAACCTGATCGACGCGATCTGGACCGACCGCCCGGCCCCGCCGACCGCA                                     <  1:3514843/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GCATCGGCCATCTCGCGGGTAAACCCGTATTCGGTGGCGATGATATCGGCGGAAATCCCCTGCGGCACGAAATAGGTCTTCATCGCAAGCGACGGATCGACGGCGATCG....................................................................................................  <  NC_014034/553453‑553345
....................................................................................................CGGCGATCGAACTGGTCGAGACGGCGAACCTGATCGACGCGATCTGGACCGACCGCCCGGCCCCGCCGACCGCAACCGCGCGGGTGCATCCGCTTGACTTCGCGGGGGA  <  NC_014034/921130‑921031

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 39 ≤  ATCG