New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 558519 =235 (1.140)2 (0.010) 2/182 34.5 0.01 coding (1584/2016 nt) dcp peptidyl‑dipeptidase Dcp
?NC_014034 2373020 = 209 (0.920)coding (1281/1341 nt) RCAP_rcc02198 histidine kinase
Rejected: Position hash score below cutoff.

CAATGCCATCGGATCGGCCGGGGCCGCGCCCTCGTGGAAGGCGAGATCGACCAGAGCCGAGGCGACGAATTCGACCGTCAGGAAACCCTGATCATAGGTCGCCGCGGCC....................................................................................................  <  NC_014034/558627‑558519
....................................................................................................GCCGCGGCCCTGCCGGAACGGGCTGACGATCTCCAGCCCGTGGCTGTCGCCGAAATATTGCCGCATCCGGCTGTGGATGTTGTGCAGCCCGATGCTTTTGCGCCCGCCA  >  NC_014034/2373020‑2373119
                                                                                                                                                                                                                 
                                                          GAGGCGACGAATTCGACCGTCAGGAAACCCTGATCATAGGTCGCCGCGGCCCTGCCGGAACGGGCTGACGATCTCCAGCCCGTGGCTGTCGCCGAAATATT                                                    >  1:1935079/1‑101 (MQ=255)
                                                                        GACCGTCAGGAAACCCTGATCATAGGTCGCCGCGGCCCTGCCGGAACGGGCTGACGATCTCCAGCCCGTGGCTGTCGCCGAAATATTGCCGCATCCGGCTG                                      <  2:1934950/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CAATGCCATCGGATCGGCCGGGGCCGCGCCCTCGTGGAAGGCGAGATCGACCAGAGCCGAGGCGACGAATTCGACCGTCAGGAAACCCTGATCATAGGTCGCCGCGGCC....................................................................................................  <  NC_014034/558627‑558519
....................................................................................................GCCGCGGCCCTGCCGGAACGGGCTGACGATCTCCAGCCCGTGGCTGTCGCCGAAATATTGCCGCATCCGGCTGTGGATGTTGTGCAGCCCGATGCTTTTGCGCCCGCCA  >  NC_014034/2373020‑2373119

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG