New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 588565 =198 (0.950)2 (0.010) 2/184 34.7 0.01 coding (552/2163 nt) purL phosphoribosylformylglycinamidine synthase II
?NC_014034 3509078 = 244 (1.080)coding (228/672 nt) RCAP_rcc03316 hypothetical protein
Rejected: Position hash score below cutoff.

GAGGGCGTGGGCTCTTACGGCAACTGCTTTGGCGTGCCGAATGTCGGCGGCGAAGTGCGCTTCCACAAAAGCTACAACGGCAACTGTCTGGTGAACGCCTTTGCCGCG....................................................................................................  <  NC_014034/588672‑588565
....................................................................................................TTGCCGCGCATCAGTTTCGCCAACAGCGCGGCCGCCAGAAGATGCACGCCGAACAAGGGCGTGAAAGACACGAAAATGCCCGCGAAAACGCCCCGGGCGATGCGATGC  >  NC_014034/3509078‑3509177
                                                                                                                                                                                                                
                                                              CCACAAAAGCTACAACGGCAACTGTCTGGTGAACGCCTTTGCCGCGCATCAGTTTCGCCAACAGCGCGGCCGCCAGAAGATGCACGCCGAACAAGGGCGTG                                               >  2:488420/1‑101 (MQ=255)
                                                                 CAAAAGCTACAACGGCAACTGTCTGGTGAACGCCTTTGCCGCGCATCAGTTTCGCCAACAGCGCGGCCGCCAGAAGATGCACGCCGAACAAGGGCGTGAAA                                            <  1:488472/101‑1 (MQ=255)
                                                                                                                                                                                                                
GAGGGCGTGGGCTCTTACGGCAACTGCTTTGGCGTGCCGAATGTCGGCGGCGAAGTGCGCTTCCACAAAAGCTACAACGGCAACTGTCTGGTGAACGCCTTTGCCGCG....................................................................................................  <  NC_014034/588672‑588565
....................................................................................................TTGCCGCGCATCAGTTTCGCCAACAGCGCGGCCGCCAGAAGATGCACGCCGAACAAGGGCGTGAAAGACACGAAAATGCCCGCGAAAACGCCCCGGGCGATGCGATGC  >  NC_014034/3509078‑3509177

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG