New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 598865 =211 (1.000)3 (0.010) 3/186 33.7 0.01 coding (117/621 nt) pmtA phosphatidylethanolamine N‑methyltransferase
?NC_014034 2853261 = 222 (0.980)coding (2003/2034 nt) RCAP_rcc02662 class II aldolase/adducin N‑terminal domain‑containing protein/short‑chain dehydrogenase/reductase family oxidoreductase
Rejected: Position hash score below cutoff.

CCAGCATGTCGGGCGACAGGTCGATGCCGGTCACCGCCACCTTCGAGGGTTCATAAAGATCCAGCGCAAGGCCGGTGCCGATCCCCACCTCCAGCACCGCGCCGCCG....................................................................................................  <  NC_014034/598971‑598865
....................................................................................................GCCGCCGTCCACCGTCATCACATGCGCCGTCGTGCGTTCGGCCCGGGCCAGCGCCACGAAAGCCTCGGCCACATGCCGCGCCTCGACCTCGGCCTTGAGCAGGTTGC  >  NC_014034/2853261‑2853360
                                                                                                                                                                                                               
                                                  TCATAAAGATCCAGCGCAAGGCCGGTGCCGATCCCCACCTCCAGCACCGCGCCGCCGTCCACCGTCATCACATGCGCCGTCGTGCGTTCGGCCCGGGCCAG                                                          >  1:3340025/1‑101 (MQ=255)
                                                              AGCGCAAGGCCGGTGCCGATCCCCACCTCCAGCACCGCGCCGCCGTCCACCGTCATCACATGCGCCGTCGTGCGTTCGGCCCGGGCCAGCGCCACGAAAGC                                              <  2:3339788/101‑1 (MQ=255)
                                                                                                  tCGCCGCCGTCCACCGTCATCACATGCGCCGTCGTGCGTTCGGCCCGGGCCAGCGCCACGAAAGCCTCGGCCACATGCCGCGCCTCGACCTCGGCCTTGAG          <  2:3657166/100‑1 (MQ=255)
                                                                                                                                                                                                               
CCAGCATGTCGGGCGACAGGTCGATGCCGGTCACCGCCACCTTCGAGGGTTCATAAAGATCCAGCGCAAGGCCGGTGCCGATCCCCACCTCCAGCACCGCGCCGCCG....................................................................................................  <  NC_014034/598971‑598865
....................................................................................................GCCGCCGTCCACCGTCATCACATGCGCCGTCGTGCGTTCGGCCCGGGCCAGCGCCACGAAAGCCTCGGCCACATGCCGCGCCTCGACCTCGGCCTTGAGCAGGTTGC  >  NC_014034/2853261‑2853360

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG