New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 607285 =NA (NA)2 (0.010) 2/184 34.7 0.02 coding (800/1749 nt) nifA1 Nif‑specific regulatory protein
?NC_014034 = 2206908 179 (0.790)coding (354/3258 nt) cobN cobaltochelatase subunit CobN
Rejected: Position hash score below cutoff.

CCGCCATCGCCGAGGTGGTGGCGCAGATCAAGCGCGTCGCCTCCACCCGGATGCCGGTTTTGCTGCGCGGCGAAAGCGGCACCGGCAAGGAATTGTTCGCCCGCGCCG....................................................................................................  <  NC_014034/607384‑607285
....................................................................................................CCGCGCCGATGACCGGCTCGATGCGCTCTCGACCCTGCCGGTTTCGACGCTGCGGCGGCTCAAGGAGCTTTGCGATGCGGGCGGCGCGGTGGCGGCGCAGGCGGCCTT  <  NC_014034/2206908‑2206801
                                                                                                                                                                                                                
                                tGCGTCGCCTCCACCCGGATGCCGGTTTTGCTGCGCGGCGAAAGCGGCACCGGCAAGGAATTGTTCGCCCGCGCCGATGACCGGCTCGATGCGCTCTCGAC                                                                             <  2:2444587/100‑1 (MQ=255)
                                 GCGTCGCCTCCACCCGGATGCCGGTTTTGCTGCGCGGCGAAAGCGGCACCGGCAAGGAATTGTTCGCCCGCGCCGATGACCGGCTCGATGCGCTCTCGACa                                                                            >  1:2444744/1‑100 (MQ=255)
                                                                                                                                                                                                                
CCGCCATCGCCGAGGTGGTGGCGCAGATCAAGCGCGTCGCCTCCACCCGGATGCCGGTTTTGCTGCGCGGCGAAAGCGGCACCGGCAAGGAATTGTTCGCCCGCGCCG....................................................................................................  <  NC_014034/607384‑607285
....................................................................................................CCGCGCCGATGACCGGCTCGATGCGCTCTCGACCCTGCCGGTTTCGACGCTGCGGCGGCTCAAGGAGCTTTGCGATGCGGGCGGCGCGGTGGCGGCGCAGGCGGCCTT  <  NC_014034/2206908‑2206801

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG