New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 637003 =219 (1.040)2 (0.010) 2/186 34.9 0.01 coding (1401/2745 nt) RCAP_rcc00596 hypothetical protein
?NC_014034 3213796 = 171 (0.760)coding (264/1323 nt) dctM3 TRAP C4‑dicarboxylate transport system permease subunit DctM
Rejected: Position hash score below cutoff.

GAAACAGCCCCGAGAGCGGCAGGTTCGACCATTCCGCATTCGCCGTGACGTGAAACAGCACCACCGCCCCCTGCCCCAGCGCCTTGCGGGTGACCAAGGGCGTGCCA....................................................................................................  <  NC_014034/637109‑637003
....................................................................................................CGTGCCAGTGACCGACCATCGCCGTGGCGAAGTTGATCATCCGCTTCGCCACCCCGCCATGGGTCAGGAAGTTCCCCGCCAGGATGAAGAACGGGATCGCCATGATC  >  NC_014034/3213796‑3213895
                                                                                                                                                                                                               
                                                                 GCCCCCTGCCCCAGCGCCTTGCGGGTGACCAAGGGCGTGCCAGTGACCGACCATCGCCGTGGCGAAGTTGATCATCCGCTTCGCCACCCCGCCATGGGTCA                                           >  2:1207824/1‑101 (MQ=255)
                                                                            CAGCGCCTTGCGGGTGACCAAGGGCGTGCCAGTGACCGACCATCGCCGTGGCGAAGTTGATCATCCGCTTCGCCACCCCGCCATGGGTCAGGAAGTTCCCC                                <  1:1207917/101‑1 (MQ=255)
                                                                                                                                                                                                               
GAAACAGCCCCGAGAGCGGCAGGTTCGACCATTCCGCATTCGCCGTGACGTGAAACAGCACCACCGCCCCCTGCCCCAGCGCCTTGCGGGTGACCAAGGGCGTGCCA....................................................................................................  <  NC_014034/637109‑637003
....................................................................................................CGTGCCAGTGACCGACCATCGCCGTGGCGAAGTTGATCATCCGCTTCGCCACCCCGCCATGGGTCAGGAAGTTCCCCGCCAGGATGAAGAACGGGATCGCCATGATC  >  NC_014034/3213796‑3213895

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 18 ≤  ATCG  < 28 ≤  ATCG  < 41 ≤  ATCG