New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 647566203 (0.990)2 (0.010) 2/182 34.5 0.01 coding (905/1485 nt) RCAP_rcc00603 alpha/beta fold family hydrolase
?NC_014034 1909086 = 209 (0.920)coding (1591/2205 nt) cheA2 chemotaxis protein CheA
Rejected: Position hash score below cutoff.

AAAAGCCCGTAACAGGCCAGATGCACCATCAGGTAATCGGCGACCAGAACCGGCAGGAAATCGATGCGAAACCGTGTCAGCACCACGGGCACGATCAGCGCGGGCAGGA....................................................................................................  >  NC_014034/647458‑647566
....................................................................................................CGGGCAGGAACAGCAGGTTGTCGATCTCGCTGTCGCTCAGCTGCGCATCCGGCGGGATCAGCCCCTTGGAGATGGCGATCTCGCGCACTTTCGGACGGTTGATCCCGGC  >  NC_014034/1909086‑1909185
                                                                                                                                                                                                                 
                                      ctCGACCAGAACCGGCAGGAAATCGATGCGAAACCGTGTCAGCACCACGGGCACGATCAGCGCGGGCAGGAACAGCAGGTTGTCGATCTCGCTGTCGCTCA                                                                        <  2:902421/99‑1 (MQ=255)
                                        CGACCAGAACCGGCAGGAAATCGATGCGAAACCGTGTCAGCACCACGGGCACGATCAGCGCGGGCAGGAACAGCAGGTTGTCGATCTCGCTGTCGCTCAag                                                                      >  1:902506/1‑99 (MQ=255)
                                                                                                                                                                                                                 
AAAAGCCCGTAACAGGCCAGATGCACCATCAGGTAATCGGCGACCAGAACCGGCAGGAAATCGATGCGAAACCGTGTCAGCACCACGGGCACGATCAGCGCGGGCAGGA....................................................................................................  >  NC_014034/647458‑647566
....................................................................................................CGGGCAGGAACAGCAGGTTGTCGATCTCGCTGTCGCTCAGCTGCGCATCCGGCGGGATCAGCCCCTTGGAGATGGCGATCTCGCGCACTTTCGGACGGTTGATCCCGGC  >  NC_014034/1909086‑1909185

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG