New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 704702 =170 (0.830)2 (0.010) 2/182 34.5 0.01 coding (520/2811 nt) RCAP_rcc00643 diguanylate cyclase/phosphodiesterase
?NC_014034 = 2311363 186 (0.820)coding (200/582 nt) RCAP_rcc02145 hypothetical protein
Rejected: Position hash score below cutoff.

TATTGCGGGCGGTGCTGTCGCGCAGCCAGGCGCGGGCGCTGACCCAGGCGCTGGATGCGGCCTTCCTGCCCCCCGACGCCGCGAGCCGGGCCCCCGCGGTGGCGCTGC....................................................................................................  <  NC_014034/704809‑704702
...................................................................................................TGGCGCTGCAGGCGGAACTGGAGGCCGAACGGGCGGCCAGCGCGCAGCTGACCGAACGGGTTCTGGCGATCCGCGAAAAGCAGGAAACCATGCTGGCCGCGCTGGAAAA  <  NC_014034/2311363‑2311264
                                                                                                                                                                                                                
                                                 GCTGGATGCGGCCTTCCTGCCCCCCGACGCCGCGAGCCGGGCCCCCGCGGTGGCGCTGCAGGCGGAACTGGAGGCCGAACGGGCGGCCAGCGCGCAGCTGA                                                            >  1:4404171/1‑101 (MQ=255)
                                                                    CCCCCCGACGCCGCGAGCCGGGCCCCCGCGGTGGCGCTGCAGGCGGAACTGGAGGCCGAACGGGCGGCCAGCGCGCAGCTGACCGAACGGGTTCTGGCGAT                                         <  2:4403899/101‑1 (MQ=255)
                                                                                                                                                                                                                
TATTGCGGGCGGTGCTGTCGCGCAGCCAGGCGCGGGCGCTGACCCAGGCGCTGGATGCGGCCTTCCTGCCCCCCGACGCCGCGAGCCGGGCCCCCGCGGTGGCGCTGC....................................................................................................  <  NC_014034/704809‑704702
...................................................................................................TGGCGCTGCAGGCGGAACTGGAGGCCGAACGGGCGGCCAGCGCGCAGCTGACCGAACGGGTTCTGGCGATCCGCGAAAAGCAGGAAACCATGCTGGCCGCGCTGGAAAA  <  NC_014034/2311363‑2311264

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG