New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 719218221 (1.070)2 (0.010) 2/182 34.5 0.01 coding (937/1233 nt) RCAP_rcc00652 sensor histidine kinase
?NC_014034 1266399 = 213 (0.940)coding (128/447 nt) phnG phosphonate metabolism protein PhnG
Rejected: Position hash score below cutoff.

GGCCCCTCGGATCTGGTGCAGGTGGCGCGGCTTCTGGTCGAGGAGGCGCGGCGGCAGGGGGCAGAGGTGCGCTTCGACGATGGCGATGTCGAAAGCCTGAGCCTGCCCG....................................................................................................  >  NC_014034/719110‑719218
....................................................................................................GCCTGCCCGAACTGGGCGCGGTGATGCTGCGCGGGCGGATGGGGGCGGGGGGGGCGCCCTTCAATCTGGGCGAGATGACGGTGACGCGCTGCGCGCTGCGGCTGGCCGA  >  NC_014034/1266399‑1266498
                                                                                                                                                                                                                 
                                                                AGGTGCGCTTCGACGATGGCGATGTCGAAAGCCTGAGCCTGCCCGAACTGGGCGCGGTGATGCTGCGCGGGCGGATGGGGGCGGGGGGGGCGCCCTTCAAT                                              >  2:545418/1‑101 (MQ=255)
                                                                           GACGATGGCGATGTCGAAAGCCTGAGCCTGCCCGAACTGGGCGCGGTGATGCTGCGCGGGCGGATGGGGGCGGGGGGGGCGCCCTTCAATCTGGGCGAGAT                                   <  1:545470/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GGCCCCTCGGATCTGGTGCAGGTGGCGCGGCTTCTGGTCGAGGAGGCGCGGCGGCAGGGGGCAGAGGTGCGCTTCGACGATGGCGATGTCGAAAGCCTGAGCCTGCCCG....................................................................................................  >  NC_014034/719110‑719218
....................................................................................................GCCTGCCCGAACTGGGCGCGGTGATGCTGCGCGGGCGGATGGGGGCGGGGGGGGCGCCCTTCAATCTGGGCGAGATGACGGTGACGCGCTGCGCGCTGCGGCTGGCCGA  >  NC_014034/1266399‑1266498

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG