New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 786020209 (0.920)2 (0.010) 2/176 33.9 0.01 coding (1119/1575 nt) pntA pyridine nucleotide transhydrogenase subunit alpha
?NC_014034 786024 = 178 (0.790)coding (1123/1575 nt) pntA pyridine nucleotide transhydrogenase subunit alpha
Rejected: Position hash score below cutoff.

GACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTC..................................  >  NC_014034/785921‑786020
....................................................................................................CCGCCGCCGCCGAAAATCGCGGCCATCGCGGCGC  >  NC_014034/786024‑786057
                                                                                                                                      
GACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCC                                   >  1:1716571/1‑101 (MQ=255)
GACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCC                                   >  2:2248339/1‑101 (MQ=255)
 ACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCC                                  <  1:2229261/101‑1 (MQ=255)
 ACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCC                                  <  2:2893746/101‑1 (MQ=255)
 ACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCC                                  <  1:2993349/101‑1 (MQ=255)
 ACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTCATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCC                                  <  2:1381965/101‑1 (MQ=255)
  CCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCG                                 >  2:3407689/1‑101 (MQ=255)
  CCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCG                                 >  1:1573381/1‑101 (MQ=255)
  CCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCG                                 <  2:3117705/101‑1 (MQ=255)
  CCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCG                                 >  1:2953723/1‑101 (MQ=255)
   CGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGC                                >  2:3282752/1‑101 (MQ=255)
   CGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGC                                >  2:2973291/1‑101 (MQ=255)
   CGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGC                                <  1:906975/101‑1 (MQ=255)
   CGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGC                                >  1:1133529/1‑101 (MQ=255)
    GACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCC                               <  1:2141549/101‑1 (MQ=255)
    GACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCC                               >  1:1138689/1‑101 (MQ=255)
    GACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCC                               <  2:3384895/101‑1 (MQ=255)
     actTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCG                              <  2:3754110/98‑1 (MQ=255)
     ACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCG                              >  1:3364677/1‑101 (MQ=255)
      CCTGACGCCCGGCAAGGAGGGCGTCGGCGTGCACAACAGGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGC                             <  1:87754/101‑1 (MQ=255)
       CTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCC                            <  1:354514/101‑1 (MQ=255)
       CTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCC                            <  2:4226994/101‑1 (MQ=255)
       CTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCC                            >  2:3337689/1‑101 (MQ=255)
       CTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCC                            <  2:3391071/101‑1 (MQ=255)
        TGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCG                           >  2:2451872/1‑101 (MQ=255)
        TGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCG                           >  1:2878557/1‑101 (MQ=255)
          ACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCGCC                         <  2:3755954/101‑1 (MQ=255)
          ACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCGCC                         <  2:3479409/101‑1 (MQ=255)
          ACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCGCC                         <  1:4159773/101‑1 (MQ=255)
          ACGCCCGGCAAGGATGGCGTCGTCATGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCGCC                         <  2:440543/101‑1 (MQ=255)
                       ATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCTCTTTCCCGCCGCCGCCGAAAATCGCGGCC            <  1:2217879/101‑1 (MQ=255)
                                 CGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTCCCGCCGCCGCCGAAAAAAGCGGCCACCGCGGCGC  >  1:4283067/1‑101 (MQ=255)
                                                                                                                                      
GACCGACCTGACGCCCGGCAAGGATGGCGTCGTCGTGCACAACATGGAAGACGACGTGATCCGCGGCGCCACCGTGACCTTTGACGGCGCGATCACTTTC..................................  >  NC_014034/785921‑786020
....................................................................................................CCGCCGCCGCCGAAAATCGCGGCCATCGCGGCGC  >  NC_014034/786024‑786057

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 28 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG