New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	862297 =	212 (1.010)	2 (0.010)	2/186	34.9	0.01	intergenic (+44/+17)	RCAP_rcc00784/sqr	hypothetical protein/sulfide:quinone oxidoreductase
	?	NC_014034	1381801 =	177 (0.780)					coding (839/3093 nt)	RCAP_rcc01294	SNF2 family helicase
Rejected: Position hash score below cutoff.

CTGCGCCGCGGGACCTCCGAGACCTTCTATGAAAAGGCCGCGATGAAGTTTCTGGGCATCGACAAGCTGAAGGCCGTCAAAAAGGGATAGCGCCCCCGCTGCCCCCG...................................................................................................  <  NC_014034/862403‑862297 ....................................................................................................GCCCCCGTGCTGGGGGTGATGGCCGAGATGCAGCGCGCCCCGCGCGAAGAGCGTGCGGCCTTCATCCGCAATCCGCGTCCGCGCCTCACCGCCGCGATCGAGGCAG  >  NC_014034/1381801‑1381899                                                                                                                                                                                                                                                                                    GAAGGCCGTCAAAAAGGGATAGCGCCCCCGCTGCCCCCGTGCTGGGGGTGATGGCCGAGATGCAGCGCGCCCCGCGCGAAGAGCGTGCGGCCTTCATCCGC                                       >  2:2429786/1‑101 (MQ=255)                                                                          CCGTCAAAAAGGGATAGCGCCCCCGCTGCCCCCGTGCTGGGGGTGATGGCCGAGATGCAGCGCGCCCCGCGCGAAGAGCGTGCGGCCTGCATCCGCAATCC                                  <  1:2429943/101‑1 (MQ=255)                                                                                                                                                                                                                CTGCGCCGCGGGACCTCCGAGACCTTCTATGAAAAGGCCGCGATGAAGTTTCTGGGCATCGACAAGCTGAAGGCCGTCAAAAAGGGATAGCGCCCCCGCTGCCCCCG...................................................................................................  <  NC_014034/862403‑862297 ....................................................................................................GCCCCCGTGCTGGGGGTGATGGCCGAGATGCAGCGCGCCCCGCGCGAAGAGCGTGCGGCCTTCATCCGCAATCCGCGTCCGCGCCTCACCGCCGCGATCGAGGCAG  >  NC_014034/1381801‑1381899 Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG