New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 89044212 (1.030)2 (0.010) 2/182 34.5 0.01 coding (98/105 nt) RCAP_rcc00080 hypothetical protein
?NC_014034 2914188 = 232 (1.030)coding (431/1239 nt) RCAP_rcc02722 hypothetical protein
Rejected: Position hash score below cutoff.

CAAGACCCGCCTTGGCCTATATCGCGGCCATGATCCGCATCTTCGACATGGACGATCGCGCCCGGCTTCGGGAACGCTTTTACGGCGAAAGCCGTTCCATCCTCGCCCG....................................................................................................  >  NC_014034/88936‑89044
....................................................................................................CCTCGCCCGCAGAGTTCCGCGGGCCGGAACGCGACTTGGGAGCGGACCTGACCGAAGAAATGACCGAGGCTTTCAAGGCTGCAGTGATCAATCTGTTCTCGCAGGATCT  >  NC_014034/2914188‑2914287
                                                                                                                                                                                                                 
                                                                  TTCGGGAACGCTTTTACGGCGAAAGCCGTTCCATCCTCGCCCGCAGAGTTCCGCGGGCCGGAACGCGACTTGGGAGCGGACCTGACCGAAGAAATGACCGA                                            >  2:2049407/1‑101 (MQ=255)
                                                                          CGCTTTTACGGCGAAAGCCGTTCCATCCTCGCCCGCAGAGTTCCGCGGGCCGGAACGCGACTTGGGAGCGGACCTGACCGAAGAAATGACCGAGGCTTTCA                                    <  1:2049544/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CAAGACCCGCCTTGGCCTATATCGCGGCCATGATCCGCATCTTCGACATGGACGATCGCGCCCGGCTTCGGGAACGCTTTTACGGCGAAAGCCGTTCCATCCTCGCCCG....................................................................................................  >  NC_014034/88936‑89044
....................................................................................................CCTCGCCCGCAGAGTTCCGCGGGCCGGAACGCGACTTGGGAGCGGACCTGACCGAAGAAATGACCGAGGCTTTCAAGGCTGCAGTGATCAATCTGTTCTCGCAGGATCT  >  NC_014034/2914188‑2914287

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG