New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 919706178 (0.900)2 (0.010) 2/174 33.7 0.01 intergenic (+111/+52) ackA1/pepP acetate kinase/aminopeptidase P
?NC_014034 = 3100468 198 (0.880)intergenic (+453/+99) RCAP_rcc02900/RCAP_rcc02903 IS3 family transposase/hypothetical protein
Rejected: Position hash score below cutoff.

GAGCAACGCGGGGGGCGCTGCCCCCCGGTCCCTTCGGGACTCCCCCCGGGATATTTGAGGCAAGATAAAAGCAGGCCCTTTAGGCTTTTTCCCTTTACCTTGCTGCAAATATC....................................................................................................  >  NC_014034/919594‑919706
....................................................................................................TGCTGCAAATATCTGTGGCACGCACTGCAAAAATTCGTGGCGCGCTACAACCAGCGCTCGTTCGGCGCCGTGGCGACCGAGGGCACCGCCTCGATCCGCGGCCGCATGCCGAT  <  NC_014034/3100468‑3100369
                                                                                                                                                                                                                     
                                                                 TAAAAGCAGGCCCTTTAGGCTTTTTCCCTTTACCTTGCTGCAAATATCTGTGGCACGCACTGCAAAAATTCGTGGCGCGCTACAACCAGCGCTCGTTCGGC                                                 <  1:3419660/101‑1 (MQ=255)
                                                                  AAAAGCAGGCCCTTTAGGCTTTTTCCCTTTACCTTGCTGCAAATATCTGTGGCACGCACTGCAAAAATTCGTGGCGCGCTACAACCAGCGCTCGTTCGGCa                                                >  2:3419421/1‑100 (MQ=255)
                                                                                                                                                                                                                     
GAGCAACGCGGGGGGCGCTGCCCCCCGGTCCCTTCGGGACTCCCCCCGGGATATTTGAGGCAAGATAAAAGCAGGCCCTTTAGGCTTTTTCCCTTTACCTTGCTGCAAATATC....................................................................................................  >  NC_014034/919594‑919706
....................................................................................................TGCTGCAAATATCTGTGGCACGCACTGCAAAAATTCGTGGCGCGCTACAACCAGCGCTCGTTCGGCGCCGTGGCGACCGAGGGCACCGCCTCGATCCGCGGCCGCATGCCGAT  <  NC_014034/3100468‑3100369

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG