New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 935194 =235 (1.120)2 (0.010) 2/186 34.9 0.01 coding (240/555 nt) RCAP_rcc00844 hypothetical protein
?NC_014034 = 953208 178 (0.790)coding (880/1488 nt) RCAP_rcc00862 divalent anion:Na+ symporter
Rejected: Position hash score below cutoff.

ACAAGGCGCTGCAAGTCGTCGCCCATGCGGGCGAGGCGCGCGAACGCTGGCTTTTGCTGCAGGAAGAAGACCTTGACCTCGCCGTGGGCGAAATGCGGATGCTGGCC....................................................................................................  <  NC_014034/935300‑935194
....................................................................................................GCTGGCCTGGGTGCTGCGCGTGCCGCTTGGCCTGCCGATGTCGGACAGCGGCATCGCGATCACCGCGGCGTTGCTGCTTTTCGCCTGCCCGCTCGGGCAGGGCCGCG  <  NC_014034/953208‑953109
                                                                                                                                                                                                               
                               CGAGGCGCGCGAACGCTGGCTTTTGCTGCAGGAAGAAGACCTTGACCTCGCCGTGGGCGAAATGCGGATGCTGGCCTGGGTGCTGCGCGTGCCGCTTGGCC                                                                             >  1:1177718/1‑101 (MQ=255)
                                                        CTGCAGGAAGAAGACCTTGACCTCGCCGTGGGCGAAAGGCGGATGCTGGCCTGGGTGCTGCGCGTGCCGCTTGGCCTGCCGATGTCGGACAGCGGCATCGC                                                    <  2:1177627/101‑1 (MQ=255)
                                                                                                                                                                                                               
ACAAGGCGCTGCAAGTCGTCGCCCATGCGGGCGAGGCGCGCGAACGCTGGCTTTTGCTGCAGGAAGAAGACCTTGACCTCGCCGTGGGCGAAATGCGGATGCTGGCC....................................................................................................  <  NC_014034/935300‑935194
....................................................................................................GCTGGCCTGGGTGCTGCGCGTGCCGCTTGGCCTGCCGATGTCGGACAGCGGCATCGCGATCACCGCGGCGTTGCTGCTTTTCGCCTGCCCGCTCGGGCAGGGCCGCG  <  NC_014034/953208‑953109

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG