| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 974307 | 1 (0.010) | 10 (0.050) | 3/172 | 32.2 | 0.10 | intergenic (+187/+72) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | = 2950684 | 175 (0.770) | intergenic (+27/‑133) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG.................................................................................................... > NC_014034/974199‑974307
................................................................................................CAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCTTGCTTCAGAAATCAAGTTCCGCATATTGCGGCGAGGGCGGCACCCCGGGCAGCTGATCTGCCAGAAGCGAGCGAAAG < NC_014034/2950684‑2950585
CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGgc > 2:2655610/1‑99 (MQ=0)
CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTC < 1:2350016/101‑1 (MQ=0)
CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTC < 1:2907924/101‑1 (MQ=0)
CAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGG > 1:1934919/1‑101 (MQ=0)
CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCg > 1:1697544/1‑100 (MQ=0)
CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATACCGGGGGTCCGGGGGCg > 2:3470574/1‑100 (MQ=0)
GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCgg > 1:2280287/1‑99 (MQ=0)
TTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCC > 1:4143133/1‑101 (MQ=0)
GCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCC > 2:698806/1‑101 (MQ=0)
CCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGG > 2:3871155/1‑101 (MQ=0)
TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG.................................................................................................... > NC_014034/974199‑974307
................................................................................................CAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCTTGCTTCAGAAATCAAGTTCCGCATATTGCGGCGAGGGCGGCACCCCGGGCAGCTGATCTGCCAGAAGCGAGCGAAAG < NC_014034/2950684‑2950585
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|