BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396302 =	130 (0.900)	94 (0.650)	41/128	6.3	0.46	coding (184/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	95 (0.420)	94 (0.650)	41/128	6.3	0.46	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 205 total aligned reads displayed.


GCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC  >  NC_014034/1396202‑1396402


gCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTt.cg                                                                                                      <  2:1183342/101‑1 (MQ=255)


   aaaaaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGGCCCGGTGAACT.TCTGTt.cgtcg                                                                                                   >  2:4415567/1‑101 (MQ=255)


     aaaCGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCt                                                                                                 >  2:4147842/1‑101 (MQ=255)


      agcGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTc                                                                                                <  2:1478854/99‑1 (MQ=255)


         ggCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTcccc                                                                                             <  2:2468864/101‑1 (MQ=255)


          gCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTccccc                                                                                            >  2:1904547/1‑101 (MQ=255)


           cgatctcTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTcccccc                                                                                           <  1:318288/95‑1 (MQ=255)


           caaTGTCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTcccccc                                                                                           <  1:1501124/99‑1 (MQ=255)


            cATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCcg                                                                                          <  1:2355906/101‑1 (MQ=255)


              tGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCcgcg                                                                                        <  1:1685042/101‑1 (MQ=255)


               gCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCgg                                                                                       <  2:1548159/101‑1 (MQ=255)


                ccTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCggg                                                                                      >  1:3035570/1‑101 (MQ=255)


                 cTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTccccccagatcg                                                                                     >  2:318253/1‑95 (MQ=255)


                    cGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCg                                                                                  >  2:1233885/1‑101 (MQ=255)


                      ggTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  1:2828677/101‑1 (MQ=255)


                      ggTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTg                                                                                <  2:756037/101‑1 (MQ=255)


                       gtgtCTGTCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTgg                                                                               <  2:3763878/101‑1 (MQ=255)


                       gtgtCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTgg                                                                               <  1:4234181/101‑1 (MQ=255)


                       gtgtCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGGgg                                                                               >  2:1254342/1‑101 (MQ=255)


                         gtCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                             >  2:2648759/1‑101 (MQ=255)


                          tCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:2187788/101‑1 (MQ=255)


                           gatcttGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                           <  1:2768225/96‑1 (MQ=255)


                           cgcgCTGTCGCTCCCCCCGCGGTGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                           <  2:2873783/98‑1 (MQ=255)


                            tGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                          >  2:4261527/1‑101 (MQ=255)


                            cggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                          <  1:3071628/100‑1 (MQ=255)


                             ggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         <  2:3963250/101‑1 (MQ=255)


                             ggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         <  1:2180746/101‑1 (MQ=255)


                             ggCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         <  2:3435283/101‑1 (MQ=255)


                              gCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        <  2:2968473/101‑1 (MQ=255)


                              gCTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGGCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        <  1:2397149/101‑1 (MQ=255)


                               cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                       <  2:3509474/101‑1 (MQ=255)


                                tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGagatc                                                                      >  2:2768035/1‑97 (MQ=255)


                                tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                                      <  1:2266601/101‑1 (MQ=255)


                                  tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAg                                                                    <  2:2922907/101‑1 (MQ=255)


                                  tCGCGCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGCACT.TTTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAg                                                                    <  1:3570796/101‑1 (MQ=255)


                                  ctgccccccccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAg                                                                    <  1:1526299/96‑1 (MQ=255)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGc                                                                   <  1:3905888/101‑1 (MQ=255)


                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGacaaaggca                                                                  >  2:2169660/1‑93 (MQ=255)


                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGGAACAAgag                                                                  >  2:1526194/1‑99 (MQ=255)


                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCa                                                                  <  1:4182896/101‑1 (MQ=255)


                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCa                                                                  >  2:3209400/1‑101 (MQ=255)


                                     cTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAg                                                                 >  1:635666/1‑101 (MQ=255)


                                     cTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAg                                                                 <  1:922632/101‑1 (MQ=255)


                                      tCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGt                                                                >  2:3686450/1‑101 (MQ=255)


                                       ccgcccGCGGGGGCGTGGATCGAAACGGC..GTAGATCTCGGTCTGGGTGCGCTCTCGGTTGCGTCGCTCCCGCCGCGGGGGCGTGGATCGAAACatggctat                                                               <  2:727273/98‑8 (MQ=0)


                                        cccccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTgg                                                              >  2:1844348/1‑101 (MQ=255)


                                        cccccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTgg                                                              >  2:241191/1‑101 (MQ=255)


                                           ccGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTggggg                                                           >  2:2954594/1‑100 (MQ=255)


                                            cgcgGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTg                                                          >  2:2289403/1‑101 (MQ=255)


                                              cgGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGCGAg                                                        >  1:3626847/1‑101 (MQ=255)


                                                 gggCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTgg                                                     >  2:2348878/1‑101 (MQ=255)


                                                   gCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGc                                                   >  2:2050690/1‑101 (MQ=255)


                                                    cGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCGGGGGGGCGGGTGGGcg                                                  >  1:2729378/1‑100 (MQ=38)


                                                    cGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCt                                                  <  1:1668923/101‑1 (MQ=255)


                                                     gTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTg                                                 <  2:569126/101‑1 (MQ=255)


                                                     gTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTg                                                 >  1:1078208/1‑101 (MQ=255)


                                                      tGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGa                                                >  2:653918/1‑101 (MQ=255)


                                                       ggATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGAc                                               <  1:51949/101‑1 (MQ=255)


                                                       ggATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGAc                                               <  1:3019721/101‑1 (MQ=255)


                                                       ggATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGAc                                               <  2:782730/101‑1 (MQ=255)


                                                         aTCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCa                                             <  1:2648931/101‑1 (MQ=255)


                                                           cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa                                           <  1:954615/101‑1 (MQ=255)


                                                           cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa                                           >  2:927717/1‑101 (MQ=255)


                                                           cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa                                           <  2:3099039/101‑1 (MQ=255)


                                                           cGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCCTCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGa                                           >  2:3854043/1‑101 (MQ=255)


                                                            gAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGAc                                          <  2:524175/101‑1 (MQ=255)


                                                            gAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGAc                                          <  2:462590/101‑1 (MQ=255)


                                                            gAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGAc                                          >  1:84278/1‑101 (MQ=255)


                                                            gAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGCGGATCGAAACAAGCAGGGGGGTGAGTGGGCTGACCAGAc                                          >  1:1192496/1‑101 (MQ=255)


                                                             aaaCAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACa                                         <  2:2691676/101‑1 (MQ=255)


                                                               aCAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACaaa                                       <  1:1601479/101‑1 (MQ=255)


                                                                cagcagGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAAc                                      <  2:3626594/101‑1 (MQ=255)


                                                                cagcagGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAAc                                      <  1:2349028/101‑1 (MQ=255)


                                                                 agcagGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACg                                     <  2:1060928/101‑1 (MQ=255)


                                                                   cagGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATCAGTGGGGTGAGTGGGCTGACCAGACAAACGCt                                   <  2:2734300/101‑1 (MQ=255)


                                                                     ggTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGt                                 <  1:2289548/101‑1 (MQ=255)


                                                                      gTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTc                                <  1:3783697/101‑1 (MQ=255)


                                                                       tCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCg                               <  1:1943153/101‑1 (MQ=255)


                                                                       tCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCg                               >  1:1165984/1‑101 (MQ=255)


                                                                         aGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCt                             <  1:399953/101‑1 (MQ=255)


                                                                          gCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTc                            <  2:1192405/101‑1 (MQ=255)


                                                                            cgcgGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTccc                          >  2:3249644/1‑101 (MQ=255)


                                                                             gcgGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTcccc                         <  2:950900/101‑1 (MQ=255)


                                                                               ggCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTcccccc                       <  1:2948475/101‑1 (MQ=255)


                                                                                 ccccGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCcgc                     >  2:37302/1‑101 (MQ=255)


                                                                                   ccGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCgg                   <  1:1551716/101‑1 (MQ=255)


                                                                                     ggTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCgggg                 <  2:621280/101‑1 (MQ=255)


                                                                                      gTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCggggg                >  1:853955/1‑101 (MQ=255)


                                                                                       tGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGc               >  1:2462175/1‑101 (MQ=255)


                                                                                         aaCT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGt             >  1:3731227/1‑101 (MQ=255)


                                                                                           cT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTgg           <  1:3630918/101‑1 (MQ=255)


                                                                                            t.tCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGa          <  1:3342242/101‑1 (MQ=255)


                                                                                              tcggTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGAt         <  2:1106612/98‑1 (MQ=255)


                                                                                              tCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGAt         >  1:3692094/1‑101 (MQ=255)


                                                                                              tCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGAt         >  2:1591111/1‑101 (MQ=255)


                                                                                                   t.cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa    <  1:3686703/101‑1 (MQ=255)


                                                                                                   t.cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa    >  2:2314589/1‑101 (MQ=255)


                                                                                                      gtcgCTCCCCCCGCGGGGGCGTGGATTGAAACAAGCTGTTGGGTGAGGGGGCTGACGAGACAAAGGCTGTGGCTCCCCCCGCGGGGGCGTGGGTCGAAAcg  >  2:3307666/1‑100 (MQ=21)


                                                                                                      gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc  >  1:3550579/1‑101 (MQ=255)


                                                                                                      gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTCGATCGAAAcc  >  2:494019/1‑101 (MQ=255)


GCGAAAAACGGCCATGCCTCCGGGTGTCTGGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCAGGTCAGCCGCGGCCCCGGTGAACT.TCTGTT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACC  >  NC_014034/1396202‑1396402

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG