| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 411494 = | 181 (0.870) | 62 (0.300) | 13/184 | 25.0 | 0.39 | intergenic (+7/+56) | RCAP_rcc00380/RCAP_rcc00381 | transglycosylase, Slt family/hypothetical protein |
| ? | NC_014034 | 1608059 = | 15 (0.070) | intergenic (+329/‑18) | RCAP_rcc01484/murD | hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
Only 100 of 204 total aligned reads displayed.
GGTGGCGGAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGCGTGAAGAG > NC_014034/411394‑411594
|
ggTGGCGGAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.ggg < 1:1550311/101‑1 (MQ=255)
gTGGCGGAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGc < 2:3592573/101‑1 (MQ=255)
tGGCGGAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.ggggg > 1:633387/1‑99 (MQ=255)
gCGGAAAGCCTGCCCGTCTATCGCGCTCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCggg < 2:558550/101‑1 (MQ=255)
cGGAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGgggg > 2:491605/1‑101 (MQ=255)
ggAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGggggg > 1:3193842/1‑101 (MQ=255)
ggAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGggggg > 2:4355911/1‑101 (MQ=255)
gAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGt < 2:4289394/101‑1 (MQ=255)
gaaGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGtt < 2:3570292/100‑1 (MQ=255)
aaaGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGggggggg > 1:1275456/1‑99 (MQ=255)
aaaGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGggggggg > 2:3945326/1‑99 (MQ=255)
aaaGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGtt < 2:4119501/101‑1 (MQ=255)
aaGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGttt < 1:3486717/101‑1 (MQ=255)
aGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCggggggtag > 1:2340689/1‑97 (MQ=255)
aGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGGGAGGC.AGGGGCGGGGGgtt > 2:1130030/1‑101 (MQ=255)
gCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATTCCGGGGCGGTCCGGTTCACCGCCGAATTTCGCGGCAACTGGGGAGGCAA.GGGCGGGGGtgta > 2:2424454/1‑98 (MQ=255)
ccTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTc.a.c < 1:3463346/101‑1 (MQ=255)
ccTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTc.a.c < 1:274698/101‑1 (MQ=255)
ccTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTc.a.c < 2:637853/101‑1 (MQ=255)
cTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTc.a.ca > 2:2784762/1‑101 (MQ=255)
tGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.a.ca.c < 2:4424822/101‑1 (MQ=255)
gCCCGTCTATCGCGCGCGGCTGGAGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.cc < 1:3608338/101‑1 (MQ=255)
gTCTATGGCGGGCGGCTGTGGCGGCCGGATGCCGGGGCTGTCCTGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCcg < 2:880155/101‑1 (MQ=255)
tCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCcgc < 1:1784857/101‑1 (MQ=255)
cTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCcgc.g < 2:829205/101‑1 (MQ=255)
tATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.AGGGGAGGGGGGTTC.C.CC.cccccccc > 1:2434129/1‑98 (MQ=255)
tATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGGTT.A.CC.ccccccccc > 1:1354536/1‑97 (MQ=255)
aTCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCATCGACGAATTGCGCGGCAAATGGTGAGGC.A.GGGCTGGGGTTTC.C.CC.CCCCCCC.Gcc > 1:2193732/1‑101 (MQ=255)
aTCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.Gcc < 1:1466740/101‑1 (MQ=255)
tCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGCGGGTTTC.A.CA.CCCCCGC.Gccc < 1:3294157/101‑1 (MQ=255)
cgcgcgcgGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.Gcccc < 2:1212383/101‑1 (MQ=255)
gcgcgGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGt < 2:2686870/101‑1 (MQ=255)
cgcgGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTg < 1:3038646/101‑1 (MQ=255)
cgcgGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTg < 1:1830422/101‑1 (MQ=255)
cgGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGGTT.A.CA.CCCCCCC.Ccccccccggg > 1:2268667/1‑96 (MQ=255)
ggCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTT.G.CA.CCCCCCC.Gccccccggggg > 1:1945095/1‑95 (MQ=255)
ggCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTCAA.CA.CCCCCGG.CCCCCCGGggg > 1:3581929/1‑101 (MQ=255)
gCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTT.A.CACCCCCCCC.GCCCCCCGGGGa > 2:1654116/1‑101 (MQ=255)
tGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.Gcccccccgggggat > 2:4040736/1‑92 (MQ=255)
tGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGatat < 2:530650/101‑1 (MQ=255)
gcggcCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTT.A.CA.CCCCCGC.GCCCCCGGGGGGTATTTcc > 1:3818085/1‑101 (MQ=39)
ggcCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGCGGGGGATTTCCgg > 1:3688571/1‑101 (MQ=255)
gcCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGc < 1:339978/101‑1 (MQ=255)
ccGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.C.CA.CACCCGC.GCCCCCCCGGGGTATTTCCTGCa > 1:1919179/1‑101 (MQ=255)
ccGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCCC.GCCCCCCTGGGAGATTTCCCGCa > 1:1694170/1‑101 (MQ=255)
cGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGCGGGGTATTTCCGGCaa > 1:429774/1‑101 (MQ=39)
cGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCaa < 2:1328400/101‑1 (MQ=255)
cGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGAGGGGGGTTG.A.CA.CTCCCGCGGCCCCCGGGGGA.ATTTCCGGCaa > 1:1376052/1‑101 (MQ=255)
gATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.AGGGGGGGGGGTTTC.ACCC.CCCCCCC.CCCCCCGGGGGAT.TTTCCCGCAAg > 1:164248/1‑101 (MQ=255)
atccgggggCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CC.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGAt < 2:4070365/96‑1 (MQ=255)
aTGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGCGGGATATTTCCGGCACGaa > 2:1298121/1‑100 (MQ=38)
aTGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGAt < 1:4106660/101‑1 (MQ=255)
tGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGTGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGCGGGATATTTTCGGCAAGATa > 1:1189121/1‑101 (MQ=38)
tGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCCC.GCCCCCCTGGGGTATTTCCGGCAAGATa > 1:4025018/1‑101 (MQ=255)
ccGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATaaa < 1:176486/101‑1 (MQ=255)
ggggCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAgg < 2:2052573/101‑1 (MQ=255)
gtgTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGAt < 2:1944966/99‑1 (MQ=255)
ggTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CG.CCCCCCC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATc < 1:2956732/101‑1 (MQ=255)
gTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCa < 2:3209407/101‑1 (MQ=255)
ctCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCa < 2:2092968/100‑1 (MQ=255)
tCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAg < 1:2808693/101‑1 (MQ=255)
tCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAg < 1:2152692/101‑1 (MQ=255)
tCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAg < 1:4252180/101‑1 (MQ=255)
tCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCCC.GCCCCCGTGGGAAATTTCCGGCCAGATAAAGGGGGTCAg > 1:2877712/1‑101 (MQ=37)
ccGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGGGGGATATTTCCGGCAAGATGAAGGGGACCaag > 1:2093105/1‑99 (MQ=37)
cGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCCC.GCCCCCGTGGGATATTTCCGGCCAGATAAAGGGGATCAagg > 2:4422148/1‑101 (MQ=38)
ggTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGc > 2:2185402/1‑101 (MQ=255)
gTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTT.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCg > 2:707306/1‑101 (MQ=255)
tCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGCGGGGTATTTCCGGCAAGATAAAGGGGATCAGGGCggt > 1:248078/1‑99 (MQ=38)
tCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCCC.GCCCCCGTGGGGTATTTTCGGCAAGATAAAGGGGGTCAGGGGGtt > 2:2042537/1‑101 (MQ=255)
tCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGtt > 2:781789/1‑101 (MQ=255)
cACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGttt < 2:3345339/101‑1 (MQ=255)
cACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGttt > 2:2936439/1‑101 (MQ=255)
aCCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTc > 1:2070083/1‑101 (MQ=255)
aCCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTc < 1:3568606/101‑1 (MQ=255)
ccGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTT.A.CA.CCCCCGC.GCCCCCGGGGGATATTTCCGGCAAGATAAAGGGGGTCAGGGGGTTTCg > 2:1293046/1‑101 (MQ=37)
cgacgaATTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg > 1:2062714/1‑101 (MQ=255)
acgaATTGCGCGGCCACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.CCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cc < 2:4225891/101‑1 (MQ=255)
acgaATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.CCCCCCGGGGGATATTTCCGGCAAGAAAAAGGGGATCAGGGGGTTTCgg.cc > 1:352322/1‑101 (MQ=37)
cgaATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGGGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTTgg.ccc > 1:485701/1‑101 (MQ=255)
gaATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cccg > 1:753495/1‑101 (MQ=255)
aaTTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.C.CA.CCCCCCC.GCCCCCCTGGGGTATTTCCCGCCAGATAAAAGGGGTCAGGGGGGTTGgg.cccgg > 1:2399160/1‑101 (MQ=255)
aTTGCGCGGCAACTGGTGAGGC.A.GGGGGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCCAGATAAAGGGGATCAGGGCGTTTCgg.cccggg > 1:2681895/1‑101 (MQ=255)
tGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cccgggcc < 2:2827550/101‑1 (MQ=255)
tGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cccgggcc < 2:2145145/101‑1 (MQ=255)
tGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGGTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTTCGGCAAGATAAAGGGGATCAGGGCGGTTCgg.cccggggc > 1:4362537/1‑99 (MQ=37)
gcgcGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CC.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cccgggccc < 1:2367108/101‑1 (MQ=255)
gcgcGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cccgggccc < 1:977132/101‑1 (MQ=255)
cgcgGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCgg.cccgggcccg < 2:1919055/101‑1 (MQ=255)
gcgGCAACTGGTGGGGG.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCcgc < 2:2323180/101‑1 (MQ=255)
cAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCcgcgcgc < 1:3640304/101‑1 (MQ=255)
ggTGAGGC.A.GGGGCGGGGTTTC.A.CA.CCCCCGC.GCCCCCGCGGGATATTTCCGGCAAGATAAAGGGGATCAGGGGGTTTCGGCCCCGGGCTcgccgggccac > 2:1455407/1‑93 (MQ=21)
ggTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGcccg > 2:1187849/1‑99 (MQ=255)
gAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGc < 2:1266623/101‑1 (MQ=255)
gAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGGGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGc > 2:2956388/1‑101 (MQ=255)
ggC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGCGt > 2:2373833/1‑101 (MQ=255)
gC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGCGTg < 1:3913128/101‑1 (MQ=255)
c.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGCGTGa < 1:2124598/101‑1 (MQ=255)
a.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGCGTGaa > 2:3490708/1‑101 (MQ=255)
a.GGGCGGGGGGTTC.A.CA.CCCCCGC.GCCCCCCTGGGATATTTCCGGCCAGATAAAAGGGTGCATGGCGTTTCGG.CCCGGCCCCGCGCGCCcccgcggtgtga > 2:1537965/1‑91 (MQ=21)
|
GGTGGCGGAAAGCCTGCCCGTCTATCGCGCGCGGCTGGGGCGGCCGGATGCCGGGGCGGTCCGGTTCACCGACGAATTGCGCGGCAACTGGTGAGGC.A.GGGCGGGGGTTTC.A.CA.CCCCCGC.GCCCCCGTGGGATATTTCCGGCAAGATAAAGGGGATCAGGGCGTTTCGG.CCCGGGCCCGCGCGCGCCAGAGCGTGAAGAG > NC_014034/411394‑411594
Base quality scores:
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 22 ≤
ATCG
< 32 ≤
ATCG
< 40 ≤
ATCG
|