BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1640005	15 (0.070)	83 (0.390)	51/190	9.8	0.85	intergenic (+85/‑60)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	1640006 =	15 (0.070)	83 (0.390)	51/190	9.8	0.85	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 101 total aligned reads displayed.


GATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....G.....G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639905‑1640088


gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAACCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g                                                                                                       <  2:3138880/101‑1 (MQ=255)


gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g                                                                                                       <  2:164450/101‑1 (MQ=255)


 aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGCAAGATGAAAACCCTCCCCTTTATC.TTTCCCCAAAAAT.TCCGGGGGGGCC.ggg....g.....g                                                                                                 >  1:2901682/1‑101 (MQ=21)


 aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTTTGGGGAAAAAGAAACCCACCCCTTTCCTC.TTTCCCCCAATAT.CCCCGGGGGCCC.cgg....g.....g                                                                                                 >  1:1690861/1‑101 (MQ=255)


 aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....g                                                                                                 <  2:1566726/101‑1 (MQ=255)


 aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....g                                                                                                 <  1:3938450/101‑1 (MQ=255)


  tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....gg                                                                                                <  2:2769765/101‑2 (MQ=255)


   cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGAAAAAGAAACCCATCCCTTTTCTCTTTTCCCCAAAATA.CCCGGGGGCCCC.ggg....g.....gg                                                                                                >  1:3704389/1‑100 (MQ=255)


   cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTTGGGGAAAAAGAAACCCATCCCTTTCATC.TTTCCCCCAAAAT.CCCCGGGGGCCC.cgg....g.....ggg                                                                                               >  1:2992017/1‑99 (MQ=255)


   cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggc                                                                                               <  2:1127864/101‑3 (MQ=255)


    ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggca                                                                                              <  2:122781/101‑4 (MQ=255)


    tgccGGATGGGACTTTCGATGCCTCCGGCGGGGATATTGGGGGCAAGATGAAACCCACCCCTTTCATC.TGGCCCCAAATAG.CCCGGGGGGCCC.ggg....g.....ggca                                                                                              <  2:944601/99‑4 (MQ=37)


     tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggcag                                                                                             <  1:186751/101‑5 (MQ=255)


      ccGGATGTTACTTTCGATGCCTCCGGCGGTAATATTTGGGGCAAGATGAAACCCTTCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggcagc                                                                                            <  2:1534906/101‑6 (MQ=25)


      ccGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGGAGAAGAAAACCATCCCCTTCATC.TTTCCCCCAATAT.CCCCGGGGGCCC.ggg....g.....gggagc                                                                                            >  2:924695/1‑96 (MQ=255)


      ccGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggcagc                                                                                            <  1:376046/101‑6 (MQ=255)


      ccGGATGTGACTTTCGATGCCTCCGGCGGGGAAATTTTGGGCAAAAAGAAAACCACCCCTTTTATC.TTTCCCCCAAAAT.CCCCGGGGGCCC.ggg....g.....gggagg                                                                                            >  1:1374570/1‑96 (MQ=255)


       cGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTTTGGGCAAGATGAAACCCATCCCTTTCATC.TTTCCCCCAATAT.CCCCGGGGGGCC.ggg....g.....gggaggg                                                                                           >  1:1367492/1‑95 (MQ=25)


        ggATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggcagcgc                                                                                          <  1:1754478/101‑8 (MQ=255)


          aTGTGACTTTCGATGCCTCCGGCGGGGATATTTTTGGCAAGATGAAACACAACCCCTTCATC.TTGCCCCACAAATACCGGGGGGGCCC.ggg....g.....ggagcgccc                                                                                         >  2:227776/1‑93 (MQ=19)


          aTGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggcagcgccc                                                                                        <  1:1745207/101‑10 (MQ=255)


           tgtgACTTTCGATGCCTCCGGCGGGGGAATTTTGGGGAAGATGAAACCCCTCCCTTTTATC.TTTCCCCCAACATCCCCGGGGGGCCC.ggg....g.....gggggggccc                                                                                        >  1:3587020/1‑92 (MQ=19)


           tgtgACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.ggg....g.....ggcagcgcccc                                                                                       <  1:1328266/101‑11 (MQ=255)


             tgACTTTCGATGCCTCCGGCGGGGAAATTTTGGGCAAGATGACACCCATCCCTTTCTTC.TTTTTCCAAATAT.CCCGCGGGGCCC.GGG....G.....g.....c..gagggcccccc                                                                              >  2:2181106/1‑91 (MQ=25)


                    cgagccccccGGGGGGGATATTGGGGGAAAGATAAACCCCATCCCTTTCATC.TTGCCCAAAATAC.CCGGGGGGGCCG.GGG....GGGCA.G.....C..G....C..CCCCCGCCACtt                                                                     <  2:2552939/93‑1 (MQ=2)


                       tGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACCTccc                                                                  >  2:2953128/1‑100 (MQ=21)


                        gCCTCCGGCGGGGGTATTTGGGGCAAAATGGAACCCATCCCCTTAATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGGGGGCG.....G.....C..G....C..CCCCCGCCACTTCCGc                                                                 >  2:1036846/1‑101 (MQ=18)


                            ccGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACg                                                             >  2:2502061/1‑101 (MQ=21)


                                cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGc                                                         >  2:2889035/1‑101 (MQ=25)


                                cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGc                                                         >  2:3046532/1‑101 (MQ=25)


                                cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGc                                                         >  2:1605325/1‑101 (MQ=25)


                                 ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCa                                                        >  1:361981/1‑101 (MQ=25)


                                 ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCa                                                        >  2:3061947/1‑101 (MQ=25)


                                 ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCa                                                        >  2:3225294/1‑101 (MQ=25)


                                  gggATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAg                                                       >  1:2493058/1‑101 (MQ=21)


                                   ggATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAgc                                                      >  2:1327615/1‑101 (MQ=25)


                                    gATTTTTGGGGCAAGAAGAACCCCATCCCTTTCCTC.TCCCCCCAAATTG.CCGGGGGGGCCG.GGG....G.....GGC...C..GCC..C..CCCCCGCCACTTCCGCCACGGGGCAgcg                                                     <  1:1286414/101‑1 (MQ=255)


                                    gATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:2499140/1‑101 (MQ=25)


                                    gATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:134956/1‑101 (MQ=25)


                                      tatTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                   >  2:34941/1‑101 (MQ=25)


                                      tatTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGCGGCAGCGcc                                                   >  2:2289237/1‑101 (MQ=21)


                                       atTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                  >  1:1050663/1‑101 (MQ=25)


                                        tttGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 >  2:170794/1‑101 (MQ=25)


                                        tttGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 >  2:585541/1‑101 (MQ=21)


                                         ttGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                >  1:1110828/1‑101 (MQ=21)


                                             ggCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCg                                            >  1:1918563/1‑101 (MQ=25)


                                               cAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  2:2376427/1‑101 (MQ=25)


                                               cAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  2:3268462/1‑101 (MQ=25)


                                                aaagataaaCCCCTCCCTTTCCTT.CTCCCCCAAACTC.CCGGGGGGGCCC.GGG....G.....GGGCCCC..C....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          <  2:3548955/95‑1 (MQ=255)


                                                aaGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                         >  2:928793/1‑101 (MQ=25)


                                                 aGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGGG....G.....G.....CA.G....CTGCCCCCGCCACTTCCGCCACGGCGCAGCGCCCCCGCCGTTGa                                        >  1:2636351/1‑101 (MQ=21)


                                                 aGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTgc                                        >  2:1326681/1‑100 (MQ=21)


                                                 aGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  1:307894/1‑101 (MQ=25)


                                                  gacgacccccACCCTTTTCACC.TCCCCCAAAAGAC.CCGGGGGGGCCG.GGG....G.....G.....C..CCCCCC..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                       <  2:414290/94‑1 (MQ=255)


                                                     aaccccccccccTTTC.TC.TTGCCCAAAATTG.CCGGGGGGGCCG.GGG....G.....GGGCCCC..C....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    <  2:1156847/92‑1 (MQ=255)


                                                      aaaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                   >  1:666993/1‑101 (MQ=25)


                                                      aaaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                   >  2:2497095/1‑101 (MQ=25)


                                                       aaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGTGGCAGCGCCCCCGCCGTTGACGAAgg                                  >  2:2972586/1‑101 (MQ=18)


                                                       aaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  2:3182954/1‑101 (MQ=25)


                                                          ccctCCCTTTTCTC.CTTCCCCAAAATG.CCCGGGGGGCCC.GGG....G.....GGGC..C..GCC..C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                <  1:3708423/98‑1 (MQ=255)


                                                           cgtctttttCACC.TTGGCCCAAATAG.CCCGGGGCTCGG.GGG....G.....G.....CCAGCC..C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                              <  2:576590/95‑1 (MQ=255)


                                                           cctCCCTTTCCTT.CTGCCCCAAATTC.CCCGGGGGGCCG.GGG....G.....GGC...C..GCCC.C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                               <  1:4327197/99‑1 (MQ=255)


                                                           cATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                              >  1:3224075/1‑101 (MQ=25)


                                                           cATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCCGCCGTTGACGAAGgaggc                              >  1:3769237/1‑99 (MQ=21)


                                                            aTCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                             >  1:996336/1‑101 (MQ=25)


                                                            aTCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                             >  1:4165218/1‑101 (MQ=25)


                                                             cccttttCCTC.TCCCCCCAAATCC.CCGGGGGGGCCG.GGG....G.....GGCAC.C..C....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                            <  1:1395202/97‑1 (MQ=255)


                                                                cTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                         >  1:4185411/1‑101 (MQ=25)


                                                                 tttCGTC.TTGCCCCAAATA..CCGGGGGGGCCG.GGG....GGGGCAG.....C..C....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        <  2:2991796/101‑1 (MQ=255)


                                                                 tttCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        >  2:2949176/1‑101 (MQ=25)


                                                                 tttCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        >  1:1348068/1‑101 (MQ=25)


                                                                  ttCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  2:1132183/1‑101 (MQ=25)


                                                                     aTC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  1:2541996/1‑101 (MQ=25)


                                                                     aTC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  2:650917/1‑101 (MQ=25)


                                                                     aTC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  2:3199038/1‑101 (MQ=25)


                                                                      tC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   >  1:3410791/1‑101 (MQ=25)


                                                                      tC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   >  2:1831399/1‑101 (MQ=25)


                                                                      tC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   >  2:3063283/1‑101 (MQ=25)


                                                                       c.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                  >  2:473330/1‑101 (MQ=25)


                                                                       c.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                  >  2:1631071/1‑101 (MQ=25)


                                                                       c.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCCGTGACGGAGGGGGCCCCGCTGTTTCa                  >  2:841184/1‑101 (MQ=16)


                                                                       c.TTCCCCCAAATTC.CCGGGGGGGCCC.GGG....G.....GGCCCCC..C....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   <  1:3695515/101‑1 (MQ=255)


                                                                         ttGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGGGACCGCGATGTTTCaa                 >  2:884845/1‑101 (MQ=25)


                                                                         ttGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  2:309034/1‑101 (MQ=25)


                                                                          tGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                >  1:4352643/1‑101 (MQ=25)


                                                                          tGCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCAGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                >  1:1886487/1‑101 (MQ=25)


                                                                           gCCCCAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa               >  1:1805490/1‑101 (MQ=25)


                                                                            ccccAGATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaaa              >  1:865870/1‑100 (MQ=25)


                                                                            ccccAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg              >  2:2437084/1‑101 (MQ=25)


                                                                             cccAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa             >  1:4190192/1‑101 (MQ=25)


                                                                               cAAATAT.CCCGGGGGGCCC.GGG....GGGGA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  2:3054581/1‑101 (MQ=37)


                                                                               cAAATAT.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  2:4001707/1‑101 (MQ=25)


                                                                                  atat.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg        >  1:3411153/1‑101 (MQ=37)


                                                                                    at.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt      >  1:4387768/1‑101 (MQ=37)


                                                                                    at.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGCCCGTTGTCGAAGGAGACCGCGCTGTTCTAAAAGATCCTGac      >  1:3907891/1‑100 (MQ=21)


                                                                                     t.CCCGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc     >  2:1498276/1‑101 (MQ=37)


                                                                                        ccGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc   >  1:2873755/1‑101 (MQ=37)


                                                                                        ccGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc   >  2:1621041/1‑101 (MQ=37)


                                                                                         cGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  2:496413/1‑101 (MQ=37)


                                                                                         cGGGGGGCCC.GGG....GGGCA.G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  1:479916/1‑101 (MQ=37)


GATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCC.GGG....G.....G.....C..G....C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639905‑1640088

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG