BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 408471	134 (0.670)	35 (0.170)	8/178	28.1	0.28	intergenic (+89/+59)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	1640006 =	45 (0.200)	35 (0.170)	8/178	28.1	0.28	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 151 total aligned reads displayed.


CACAACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCG  >  NC_014034/408371‑408567


cacaACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCgggggg                                                                                                             <  2:4415233/101‑1 (MQ=255)


 acaACGTCTGAGAGGCTGGGGGGGCTGCCCCCCGACCCCCCGGGG.ATTTTCAGGCAA.AGGAAG.CCGCCGAGCTTAATTTTGTCGTCAA.TCT.ACCggggggg                                                                                                            >  2:559216/1‑100 (MQ=255)


 acaACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGa                                                                                                            <  1:1206921/101‑1 (MQ=255)


 acaACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGa                                                                                                            <  1:3422896/101‑1 (MQ=255)


   aaCGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTTC.GGGAAGAAGAAA.CCGATGTCCTTCCTCTTTCCCCAAA.AAT.CCCCGGGGGGgg                                                                                                          >  1:1064446/1‑101 (MQ=21)


      gTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCtt                                                                                                       <  1:1452179/101‑1 (MQ=255)


      gTCGGAGAGGCGGGGGCCCCTCCCCCCAGCCCCCGGGAAT.ATTTGC.GCAAAGA.GAAGCCCGTTGCCCTTCATCTTCCCGAAAA.TAT.CCCGGGGGGAGGCtt                                                                                                       <  2:1606979/101‑1 (MQ=12)


       tCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTg                                                                                                      <  1:271960/101‑1 (MQ=255)


        cTGAGAGGCTGGGGGCTCTGCCCCCCGACCCCCGGGAT.ATTTGC.GGGAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCCGGGGGGGGCGTGc                                                                                                     >  1:683725/1‑101 (MQ=21)


         ggaggGGTTGGGGGCTCTGCCCCAGGACCCCGGGGAG.ATTGCC.GGAAAGATGAAG.CCGTTTTCCTTCACCTTTCCGCAAA.TAT.CCCGGGGGGAGGCTTGCt                                                                                                    <  2:1851621/100‑1 (MQ=16)


           agagGCTGGGGGGTCTGCCCCCCGACCCCCCGGGT.ATTTTC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCCAA.AAT.CCCCGGGGGAGGGTTGCTGa                                                                                                  >  2:4227161/1‑101 (MQ=25)


            gagGCTGGGGGCTCTGCCCCCAGACCCCCGGTAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGaa                                                                                                 <  2:339182/101‑1 (MQ=255)


             agGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGaaa                                                                                                >  1:4140159/1‑101 (MQ=255)


               gCTGGGGGCTCTGCCCCCAGACCCCCGGGGTAATTTGG.GGCAGGAGAAAC.CCGAT.TTCTTCATCCTTCCCCAAATTAT.CCCGGGGGGCGGCTGGCGGaaac                                                                                               >  2:3192627/1‑100 (MQ=9)


               gCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGc                                                                                              >  1:3941320/1‑101 (MQ=255)


                 tGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCaa                                                                                            >  2:4414898/1‑101 (MQ=255)


                 tGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCCTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCaa                                                                                            >  1:4444243/1‑101 (MQ=255)


                 tGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.ACGATGTACTTCATCTTGCAGCAAA.TAT.CCCGGGGGGAGGCATGCTGGAAGCaa                                                                                            >  2:3495352/1‑101 (MQ=25)


                 gggggcCCCTCCCCCCAGACCCCGGGTAT.TTTGGG.GGCAAGAGAAAG.CCGATTTCCTTCATTTTGCCGAAAA.TTT.CCCGGGGGGAGGCTTGCTGAAAGCaa                                                                                            <  1:1026399/100‑1 (MQ=255)


                  gggggCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCaag                                                                                           >  1:2490310/1‑100 (MQ=255)


                   ggggCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCaaga                                                                                          >  2:2301447/1‑99 (MQ=255)


                   ggggCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAACaagc                                                                                          >  2:3956188/1‑99 (MQ=255)


                    gggCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCaagac                                                                                         <  2:3045127/101‑4 (MQ=255)


                    gggCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAACCaagac                                                                                         >  1:1322724/1‑98 (MQ=255)


                     ggCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGGAAGAaaaaag                                                                                        >  1:2353833/1‑98 (MQ=255)


                       ctctGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACggg                                                                                     >  2:2963218/1‑101 (MQ=255)


                        tctGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACgggg                                                                                    >  1:2402885/1‑101 (MQ=255)


                         ctGCCCCCAGCCCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg                                                                                   <  2:1872354/101‑1 (MQ=255)


                         ctGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg                                                                                   >  1:386994/1‑101 (MQ=255)


                           gCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                            >  2:2845506/1‑101 (MQ=255)


                           ccccccAGCCCCCGGGGAT.TTTGGC.GGAAAGATGAAC.CCGATGTCCTTCATCTTGCCGAAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                            <  2:2228571/100‑1 (MQ=25)


                            cccccAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gca                                                                           >  1:1204423/1‑100 (MQ=255)


                             ccccCGGCCCCGGGGAA.TTTTGG.GGCAAAGAGAAGCCCGTTGTCTTTCTTC.TGCCCAAAA.TTTCCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gca                                                                           <  2:3126802/101‑2 (MQ=255)


                             ccccAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcag                                                                          <  2:2684992/101‑3 (MQ=255)


                             ccccAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcag                                                                          >  1:4414609/1‑99 (MQ=255)


                              cccAGACCCCGGGGAT.ATTTGG.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcaga                                                                         <  1:4435016/101‑4 (MQ=25)


                               ccAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagag                                                                        <  2:4234465/101‑5 (MQ=255)


                                cAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagc                                                                       <  2:4019496/101‑6 (MQ=255)


                                cAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagc                                                                       <  2:2490147/101‑6 (MQ=255)


                                  gACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagccc                                                                     <  2:2663694/101‑8 (MQ=25)


                                   aCCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagcgtccc                                                                    >  2:1424686/1‑93 (MQ=25)


                                   aCCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagcccc                                                                    >  2:192571/1‑93 (MQ=25)


                                                  tGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGcc                                                     >  1:4291385/1‑101 (MQ=21)


                                                  tGC.GGCAAGAGGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGcc                                                     <  2:491217/101‑1 (MQ=18)


                                                         aaGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAgg                                               >  1:1565829/1‑101 (MQ=21)


                                                         aaGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAgg                                               >  2:2068729/1‑101 (MQ=21)


                                                           gATAAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgac                                             <  1:1234996/101‑1 (MQ=18)


                                                            aTGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgacc                                            <  2:4139898/101‑1 (MQ=21)


                                                             tGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccg                                           <  2:1388660/101‑1 (MQ=21)


                                                             tGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccg                                           <  1:2594633/101‑1 (MQ=21)


                                                              gAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccga                                          >  1:96501/1‑101 (MQ=21)


                                                              gAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccga                                          >  2:2331352/1‑101 (MQ=21)


                                                              gAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccga                                          >  1:1400519/1‑101 (MQ=21)


                                                               aaG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccgac                                         >  1:563762/1‑101 (MQ=21)


                                                                 g.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACAGACCt                                       >  2:1339261/1‑101 (MQ=18)


                                                                   ccGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTc                                      <  2:3291327/101‑1 (MQ=21)


                                                                    cGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCa                                     <  2:2251903/101‑1 (MQ=21)


                                                                    cGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCa                                     <  2:2041322/101‑1 (MQ=21)


                                                                     gATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAg                                    >  1:3425982/1‑101 (MQ=21)


                                                                     gATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAg                                    >  1:3199251/1‑101 (MQ=21)


                                                                        gTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                 <  2:3783/101‑1 (MQ=21)


                                                                        gTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                 >  1:3186489/1‑101 (MQ=21)


                                                                         tCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                >  2:2849959/1‑101 (MQ=21)


                                                                         tCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                >  1:1849518/1‑101 (MQ=21)


                                                                         tCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                >  2:129135/1‑101 (MQ=21)


                                                                          ccTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg                               >  2:459350/1‑101 (MQ=21)


                                                                          ccTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTAGCCAAAAGGACCGACCTCAGATCAg                               >  2:301315/1‑101 (MQ=18)


                                                                          ccTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGGCGCCAAAAGGACCGACCTCAGATccg                               >  1:2383108/1‑99 (MQ=18)


                                                                           cTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                              >  2:4356696/1‑101 (MQ=21)


                                                                           cTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                              >  1:1371001/1‑101 (MQ=21)


                                                                           cTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                              >  2:2111752/1‑101 (MQ=21)


                                                                           cTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                              >  1:665178/1‑101 (MQ=21)


                                                                           cTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....GCAGAGACCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                              >  2:1988322/1‑101 (MQ=21)


                                                                            ttCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc                             <  2:1838755/101‑1 (MQ=21)


                                                                             tCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                            <  2:1550886/101‑1 (MQ=21)


                                                                             tCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                            >  1:2442045/1‑101 (MQ=21)


                                                                             tCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                            <  1:4154338/101‑1 (MQ=21)


                                                                                 cTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                        >  2:4164361/1‑101 (MQ=25)


                                                                                 cTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                        >  2:1159957/1‑101 (MQ=25)


                                                                                   tGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg                      >  1:1815177/1‑101 (MQ=25)


                                                                                   tGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg                      >  2:191748/1‑101 (MQ=25)


                                                                                   tGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg                      >  1:1867594/1‑101 (MQ=25)


                                                                                    gCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                     >  1:1654988/1‑101 (MQ=25)


                                                                                    gCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                     >  1:3622370/1‑101 (MQ=25)


                                                                                     ccGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGtt                    >  2:2993629/1‑101 (MQ=25)


                                                                                      cGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTg                   >  2:4054662/1‑101 (MQ=25)


                                                                                        cAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                 >  2:1176575/1‑101 (MQ=25)


                                                                                        cAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                 >  1:2223171/1‑101 (MQ=25)


                                                                                        cAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                 <  1:978520/101‑1 (MQ=255)


                                                                                         aaa.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTGGCac                >  2:4305217/1‑100 (MQ=25)


                                                                                          aa.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc               >  1:607924/1‑101 (MQ=255)


                                                                                          aa.TAT.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc               >  1:2012001/1‑101 (MQ=255)


                                                                                              at.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg            >  2:186368/1‑101 (MQ=255)


                                                                                               t.CCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg           >  1:3538011/1‑101 (MQ=255)


                                                                                                   cGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGAAGAGC.....CCCC.CGCACAGGTCGCAAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggcgg        >  2:3477870/1‑100 (MQ=255)


                                                                                                     gggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa      <  1:2515490/101‑1 (MQ=255)


                                                                                                       gggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg    >  2:2383846/1‑101 (MQ=255)


                                                                                                       gggAGGATTGCTGAAAGC.AAGACGGGGG.....GCAGAG.CCCCGCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg    <  2:1718445/101‑1 (MQ=255)


                                                                                                        ggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc   >  2:1603751/1‑101 (MQ=255)


                                                                                                        ggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc   >  2:1757440/1‑101 (MQ=255)


CACAACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TAT.CCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCG  >  NC_014034/408371‑408567

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG