New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1478517 =187 (0.900)21 (0.100) 5/184 31.3 0.13 intergenic (+5/+138) RCAP_rcc01372/RCAP_rcc01373 ABC transporter ATP‑binding protein/RpiR family transcriptional regulator
?NC_014034 1640014 = 101 (0.450)intergenic (+94/‑51) mccB/mccA methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 200 total aligned reads displayed.

GACACGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTG  >  NC_014034/1478417‑1478616
                                                                                                    |                                                                                                   
gACACGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCg                                                                                                     >  1:1705638/1‑101 (MQ=255)
   acGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCgggg                                                                                                  <  1:1066159/101‑1 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCgggggg                                                                                                >  1:985800/1‑100 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgc                                                                                                <  1:3690910/101‑1 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgc                                                                                                >  1:2091027/1‑101 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGACGATCTGCTGGTGATCGGCGCCTGAGGGGgggggg                                                                                                >  2:2499868/1‑100 (MQ=255)
     gTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCAGCCCATCTGCTGGTGATCGGCGCCTGAGGGCgggggg                                                                                                >  1:3814290/1‑100 (MQ=255)
      ttCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgcg                                                                                               <  1:2482365/101‑1 (MQ=255)
      ttCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGGGATCGGCGCCTGAGGGTGGGGgcg                                                                                               >  2:367104/1‑101 (MQ=255)
       tCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGgcgc                                                                                              <  2:1251856/101‑1 (MQ=255)
        caacaaCAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCt                                                                                             <  2:116342/101‑1 (MQ=255)
         aacaacAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTg                                                                                            <  1:1332736/101‑1 (MQ=255)
          acaacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTga                                                                                           >  2:571711/1‑100 (MQ=255)
          acaacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGc                                                                                           >  2:4267480/1‑101 (MQ=255)
           caacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGcc                                                                                          <  1:1614839/101‑1 (MQ=255)
            aacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGGCGccc                                                                                         >  1:3669244/1‑101 (MQ=255)
            aacaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGccc                                                                                         >  1:1448407/1‑101 (MQ=255)
             acaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGcccc                                                                                        <  1:3110233/101‑1 (MQ=255)
             acaGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGcccc                                                                                        <  2:3708420/101‑1 (MQ=255)
               aGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCg                                                                                      <  1:4074993/101‑1 (MQ=255)
                 ccATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGGGCTGCCCCCGCa                                                                                    >  1:2222912/1‑101 (MQ=255)
                  cATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGGTGccccccccc                                                                                   >  2:2388447/1‑97 (MQ=255)
                  cATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAc                                                                                   <  1:3766759/101‑1 (MQ=255)
                  cATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAc                                                                                   <  1:938850/101‑1 (MQ=255)
                   aTGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAcc                                                                                  >  1:27551/1‑101 (MQ=255)
                      ccgcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCAccccc                                                                               >  1:4055104/1‑101 (MQ=255)
                       cgcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCg                                                                              >  1:3956550/1‑101 (MQ=255)
                        gcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCgg                                                                             <  1:824673/101‑1 (MQ=255)
                        gcgccgcCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCgg                                                                             <  2:3050391/101‑1 (MQ=255)
                          gccgccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCCCACCCCCCGGa                                                                           >  1:593733/1‑101 (MQ=255)
                           ccgccgcATGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGat                                                                          <  2:805384/101‑1 (MQ=255)
                             gccgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGatat                                                                        <  1:85918/101‑1 (MQ=255)
                               cgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGGTGCCCCCGCACCCCCGGGATAttt                                                                      >  1:1242025/1‑101 (MQ=255)
                               cgcAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATAttt                                                                      <  2:3432743/101‑1 (MQ=255)
                                 cAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTgg                                                                    <  1:2385459/101‑1 (MQ=255)
                                 cAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTgg                                                                    <  2:2045770/101‑1 (MQ=255)
                                    gTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGc                                                                 <  2:2100589/101‑1 (MQ=255)
                                     tGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCa                                                                <  1:1585296/101‑1 (MQ=255)
                                      ggggACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCaa                                                               <  1:3271317/101‑1 (MQ=255)
                                      ggggACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCaa                                                               <  2:3328344/101‑1 (MQ=255)
                                         gACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGAt                                                            <  1:3711804/101‑1 (MQ=255)
                                          aCCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATg                                                           <  1:2878424/101‑1 (MQ=255)
                                          aCCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATg                                                           <  2:3296395/101‑1 (MQ=255)
                                          aCCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATg                                                           <  2:1126989/101‑1 (MQ=255)
                                           ccGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGa                                                          <  1:3301091/101‑1 (MQ=255)
                                                 tCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCAc                                                    <  1:130446/101‑1 (MQ=255)
                                                 tCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCAc                                                    >  2:3232073/1‑101 (MQ=255)
                                                  cACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTTGAGCAAGATGAAAGCACg                                                   >  2:4338418/1‑101 (MQ=255)
                                                  cACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACg                                                   <  2:1845481/101‑1 (MQ=255)
                                                  cACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACg                                                   >  1:4439161/1‑101 (MQ=255)
                                                   aCGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGa                                                  >  2:963894/1‑101 (MQ=255)
                                                    cGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGAt                                                 <  2:1517299/101‑1 (MQ=255)
                                                    cGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGAt                                                 <  1:4344246/101‑1 (MQ=255)
                                                      cTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCt                                               <  1:3985561/101‑1 (MQ=255)
                                                      cTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCt                                               <  2:3972538/101‑1 (MQ=255)
                                                         ggCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCg                                            >  2:2301503/1‑101 (MQ=255)
                                                         ggCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCg                                            >  1:1684184/1‑101 (MQ=255)
                                                             tCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGttt                                        <  1:3308680/101‑1 (MQ=255)
                                                               aaTGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTc                                      <  2:4436064/101‑1 (MQ=255)
                                                                aTGCGGTCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCa                                     <  2:1374711/101‑1 (MQ=255)
                                                                aTGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCa                                     <  1:745031/101‑1 (MQ=255)
                                                                aTGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCa                                     <  1:954007/101‑1 (MQ=255)
                                                                 tGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCNCGATCTGCGGTTTTCAt                                    >  2:724191/1‑101 (MQ=255)
                                                                 tGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAt                                    >  2:551840/1‑101 (MQ=255)
                                                                 tGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAt                                    <  1:1153029/101‑1 (MQ=255)
                                                                  gCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAtt                                   <  2:1926045/101‑1 (MQ=255)
                                                                  gCGGACGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCAtt                                   >  1:2929317/1‑101 (MQ=255)
                                                                    ggCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTa                                 <  2:3383869/101‑1 (MQ=255)
                                                                    ggCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTa                                 <  2:2157478/101‑1 (MQ=255)
                                                                     gCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTAt                                <  2:593665/101‑1 (MQ=255)
                                                                       cGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCt                              <  2:3560356/101‑1 (MQ=255)
                                                                       cGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCt                              <  1:2047232/101‑1 (MQ=255)
                                                                        gATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCtt                             <  1:938882/101‑1 (MQ=255)
                                                                         aTCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTg                            >  2:2629675/1‑101 (MQ=255)
                                                                         aTCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTg                            <  1:244261/101‑1 (MQ=255)
                                                                            tgctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCtt                         >  1:676573/1‑101 (MQ=255)
                                                                            tgctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCtt                         <  1:180134/101‑1 (MQ=255)
                                                                             gctgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTc                        >  1:3356707/1‑101 (MQ=255)
                                                                               tgGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCaa                      >  2:3852743/1‑101 (MQ=255)
                                                                                ggTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCaaa                     <  1:2128902/101‑1 (MQ=255)
                                                                                 gTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAat                    <  1:721928/101‑1 (MQ=255)
                                                                                 gTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAat                    <  1:4277769/101‑1 (MQ=255)
                                                                                 gTGATCGGCGCCTGAGGGCGGGGACTCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTTCGGTTTTCATTTATCTTGCTTCAAat                    <  2:1244960/101‑1 (MQ=255)
                                                                                  tGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGTGCAAGGTGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAata                   <  1:4407508/101‑1 (MQ=255)
                                                                                   gATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAatat                  >  2:927919/1‑101 (MQ=255)
                                                                                   gATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAatat                  <  1:2519011/101‑1 (MQ=255)
                                                                                    aTCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATc                 >  1:4395869/1‑101 (MQ=255)
                                                                                    aTCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATc                 <  1:551892/101‑1 (MQ=255)
                                                                                      cGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATccc               >  2:2019680/1‑101 (MQ=255)
                                                                                       ggCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCg              <  1:4267749/101‑1 (MQ=255)
                                                                                       ggCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCg              <  1:2302626/101‑1 (MQ=255)
                                                                                          cgcTGAGGGCGGGGGCGCTGCCCCCGCCCCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCgggg           <  2:2532247/99‑1 (MQ=255)
                                                                                            cTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCgggggg         >  1:1850324/1‑101 (MQ=255)
                                                                                            cTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCgggggg         >  2:30649/1‑101 (MQ=255)
                                                                                             tGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGt        >  1:3447623/1‑101 (MQ=255)
                                                                                              gAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTg       >  1:2641745/1‑101 (MQ=255)
                                                                                               ggggCGGGGGCGCTGCCCCCGCCCCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGTTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGa      <  1:2287143/100‑1 (MQ=255)
                                                                                               ggggCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGa      <  1:890958/100‑1 (MQ=255)
                                                                                                  gCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAAtt   <  2:4380043/101‑1 (MQ=255)
                                                                                                   cGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTg  <  1:4134848/101‑1 (MQ=255)
                                                                                                    |                                                                                                   
GACACGTTCAACAACAGCCATGCCGCGCCGCCGCAGGTGGGGACCGAGGTCACGCTCGGCCTCAATGCGGCCGATCTGCTGGTGATCGGCGCCTGAGGGCGGGGGCGCTGCCCCCGCACCCCCGGGATATTTGGAGCAAGATGAAAGCACGATCTGCGGTTTTCATTTATCTTGCTTCAAATATCCCGGGGGGTGAATTG  >  NC_014034/1478417‑1478616

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG