BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473410 =	134 (0.710)	2 (0.010)	2/166	32.8	0.01	intergenic (+117/+102)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
*	?	NC_014034	= 1875017	180 (0.800)	2 (0.010)	2/166	32.8	0.01	intergenic (+129/+111)	RCAP_rcc01736/oxyR	acyltransferase/hydrogen peroxide‑inducible genes activator
Rejected: Position hash score below cutoff.

Only 100 of 177 total aligned reads displayed.


GGATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAGGGG  >  NC_014034/1473310‑1473510


ggATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAg                                                                                                        >  1:3223097/1‑101 (MQ=255)


 gacggggCGAAACAGGAAACGCATCGCGTTGCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgg                                                                                                       <  1:331438/97‑1 (MQ=255)


  aTCGGGCGGAACAGGAAACGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAggg                                                                                                      <  1:1700883/101‑1 (MQ=255)


    cGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcg                                                                                                    >  1:2743341/1‑101 (MQ=255)


     gggGGGAACAGGAACCCCCTCCCTTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcgg                                                                                                   <  1:1621897/101‑1 (MQ=37)


      ggCGGAACAGGAACCGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcggg                                                                                                  <  2:4236407/101‑1 (MQ=255)


      ggCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcggg                                                                                                  >  2:2076163/1‑101 (MQ=255)


      ggCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcggg                                                                                                  >  1:1637567/1‑101 (MQ=255)


      ggCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCCCCCCgggcggg                                                                                                  >  2:2954059/1‑101 (MQ=255)


       gCGGAACAGAAACCCCTTCGCTTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcgggg                                                                                                 <  2:1061218/101‑1 (MQ=37)


        gggAACAGAAACCGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcggggc                                                                                                <  1:2464358/100‑1 (MQ=255)


        cGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCCAgggcggggc                                                                                                >  1:88283/1‑101 (MQ=255)


         ggACCAGGAAACGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAgggcggggcg                                                                                               <  2:699023/101‑1 (MQ=255)


          gAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCCAGggcggggcgg                                                                                              >  2:75730/1‑101 (MQ=255)


            aCAGGAACCGCTTCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGgggcgggc                                                                                            <  1:3609587/101‑1 (MQ=255)


            aCAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGgcggggcgggg                                                                                            >  2:625919/1‑100 (MQ=255)


             cAGGAACCGCATCGCTTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGggcgggcg                                                                                           <  2:1344540/101‑1 (MQ=255)


             cAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAACGCCCGCCGAGGGCGGggcgggcg                                                                                           >  2:935037/1‑101 (MQ=255)


              aGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGggg.gggcggc                                                                                         >  2:3443413/1‑99 (MQ=255)


              aGGAAACGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGgcgc                                                                                          <  2:489913/101‑1 (MQ=255)


                gAAACGCATCGCGTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTg                                                                                        <  1:1087868/101‑1 (MQ=255)


                   aCGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGGGGGGGCTCGcc                                                                                     >  1:3461739/1‑101 (MQ=255)


                     gCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGgcggggcggggggcgggcgc                                                                                   >  2:2467194/1‑91 (MQ=255)


                       aTCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCCGGGCCA.gg                                                                                >  2:4128588/1‑101 (MQ=38)


                        ccgcgTTCCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.ggg                                                                               <  2:2893580/100‑1 (MQ=255)


                         cgctTTCCCCCGCCCGTCGCGCACCCCCCGGGCACGA.CCGTTCCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.c                                                                             <  2:40662/101‑1 (MQ=37)


                         cgcgTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCTGGGCGA.GGG.c                                                                             >  1:1916837/1‑101 (MQ=255)


                            gTTCCCCCGCCGGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCtt                                                                          <  2:186946/101‑1 (MQ=255)


                             tttCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCttt                                                                         <  2:2088166/101‑1 (MQ=255)


                             tttCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAACGCCCGCCCAGGGCGGGGCGGGCGCCGGGCGG.ggggcctt                                                                          >  2:3148606/1‑96 (MQ=37)


                             ttcccccGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCttt                                                                         <  1:451589/98‑1 (MQ=255)


                              tcccccCCCCGCCGCGCACCCGCCCGGC.CGACCCGTTTCCCCATGCGCA.GCAGAGGCGAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTg                                                                        <  2:2124202/99‑1 (MQ=21)


                                ccccGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGGGGGGGCTGGGCGA.GGG.CCCTTggg                                                                      >  1:2209538/1‑101 (MQ=38)


                                ccccGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCTGGCCGG.GGG.CCGTTggc                                                                      >  2:3422249/1‑100 (MQ=255)


                                 cccgcccgTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCCGGCCGG.GGG.CCCTTGGGc                                                                     >  1:2312431/1‑101 (MQ=38)


                                   cgcccgTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCTGGGCGA.GGG.GCCTTGGGccc                                                                   >  2:1176487/1‑101 (MQ=38)


                                   cgcccgTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAACGCCCGCCGAGGGCGGGGCGGGGGCCGGGCGA.GGG.CCTTTGGGccc                                                                   >  1:2773829/1‑101 (MQ=38)


                                    gcccgCCGCGCACCCGCCCGGCCCGA.CCGTTCCCCCAGGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGcccc                                                                  <  1:283998/101‑1 (MQ=25)


                                     cccgTCGCGCAACCGCCCGGCACGA.CCGTTGGCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCCGGCCGA.GGG.CCTTTGGGgcccc                                                                 >  1:3973928/1‑101 (MQ=37)


                                     cccgTCCCCCACCCGCCCGCCACGA.CCGTTCCCCCACGCCCC.GCAGCGCCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGccccc                                                                 <  1:2700875/101‑1 (MQ=18)


                                      ccgTCGCGCACCCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCcg                                                                <  1:2479411/101‑1 (MQ=255)


                                         gcgcgCAACCGCCCGGCACGA.CCGTTCCCCCAAGCGCA.GCAGAGGCCAGCCCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCcggcg                                                             <  2:3904108/100‑1 (MQ=255)


                                           gcgcAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTTGGCCCCcggcggc                                                           >  2:1748529/1‑100 (MQ=255)


                                             gcACCCGCCCGGCCCGA.CCGTTCCCCCAAGCGAA.GCGGAGCCCGGCCCCCGCGGAGGGGGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCa                                                         <  2:653676/101‑1 (MQ=18)


                                             gcAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTTGGCCCCCGGCGGTcc                                                         >  2:2043436/1‑100 (MQ=255)


                                             gcAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCCAGGGCGGGGCGGGGGCGGGCCGA.GGG.GCTTTGGGCCCCccgcggcgc                                                         >  1:803983/1‑98 (MQ=37)


                                             ccacccccccGGCACGT.CC.TTTCCCCGAGGGGAGGAAGGGCCCAGCCCCCCCCGGGGCCGGGGGTGCCCCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCa                                                         <  1:1158695/94‑1 (MQ=2)


                                              cacccGCCCGGCACGC.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCAc                                                        <  2:3609309/98‑1 (MQ=255)


                                               aaCCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGACGGCGGGGCGGGCGCTGGGCCA.GGG.CCCTTGCGCCCCCGGGGGTCACg                                                       >  2:1744806/1‑101 (MQ=37)


                                                aCCGCCGGGCACGC.CCGTTCCCCAAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACgg                                                      <  2:4321553/101‑1 (MQ=21)


                                                 ccccccGGCACGA.CCGTTCCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACggg                                                     <  1:3673896/98‑1 (MQ=255)


                                                     ccGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCCGCGGTCACGGGGCaa                                                 >  2:3325798/1‑101 (MQ=255)


                                                       ggCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAACGCCCGCCGAGGGCGGGGCGGGCGCTGGGCGAGGGG.CCTTTGGGCCCCC.GCGGGCACGGGGCaaaa                                               >  2:2413023/1‑100 (MQ=25)


                                                        gCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATg                                              <  2:4375902/101‑1 (MQ=255)


                                                          aCGC.CCGTTCCCCCAAGCGCA.GCAGAGCCCGGCCCCCGCCGGGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTc                                            <  1:75743/101‑1 (MQ=18)


                                                           cGA.CCGTTTCCCCAAGCGCA.GCAGAGGACAACGCCCGCCGAGGGCGGGGGGGGCGCCGGCCGA.GGGCCCTTTGGCCCCCCGCGGGCCACGGGGCaacatcc                                            >  2:1195305/1‑96 (MQ=21)


                                                            gA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCCTTGGGCCCCCCGCGGGCCCGGGGCAAAAGTcgc                                          >  2:1601165/1‑101 (MQ=25)


                                                            cgcccGTTCCCCCAGGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTcg                                           <  2:436666/98‑1 (MQ=255)


                                                             gcccGTTCCCCCAGGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTcgc                                          <  2:2439439/99‑1 (MQ=255)


                                                             cccggTTCCCCCAAGCGCA.GCGGAGCCAAGCCCCCGCCGGGGGGGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTcgc                                          <  1:2043573/97‑1 (MQ=17)


                                                                 tttcccccAGGCGAG.GGAGGGGCCCGCCCCCGCCGGGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCAt                                      <  1:919874/97‑1 (MQ=14)


                                                                 gTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGGCACGGGGCCAATGTCGCGCAt                                      >  2:3885958/1‑101 (MQ=255)


                                                                 gTTTCCCCAAGCGCA.GCAGAGGCCAAGGCCAGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.ACCTTGGGGCACCGGCGGTCACGGGGGCAATGGCgcgcca                                      >  2:711092/1‑99 (MQ=18)


                                                                  ttcccccAGGCGCA.GCAGGGGCCAGCCCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATg                                     <  2:2743151/98‑1 (MQ=21)


                                                                   ttCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGT.CCTTTGCGCCCCCGGCGGGCACGGGGCAAATGGcgcggctga                                    >  2:503387/1‑96 (MQ=21)


                                                                   tcccccAAGCGCA.GAAGAGGCCAGCCCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGa                                    <  2:3191682/99‑1 (MQ=255)


                                                                    tCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGAc                                   <  1:776472/101‑1 (MQ=255)


                                                                    cccccAGGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGAc                                   <  1:580950/100‑1 (MQ=255)


                                                                     ccccAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGGGCTGGCCGA.GGG.CCTTTGGGGCCCCGGCGGGCACGGGGCAAATGTCGCGCATGAcc                                  >  1:3045010/1‑101 (MQ=255)


                                                                      cccAAGCGCA.GCGGGGCCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCt                                 <  1:3881175/101‑1 (MQ=255)


                                                                      ccaaggcgcA.GCAGGGGCCGGCCCCCGCGGGGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCt                                 <  2:2343108/96‑1 (MQ=17)


                                                                        cAAGCGCA.GCAGGGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCg                               <  1:1214212/101‑1 (MQ=255)


                                                                        cAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCg                               >  2:2163508/1‑101 (MQ=255)


                                                                        cAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCg                               >  1:825074/1‑101 (MQ=255)


                                                                         aaGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.GCTTTGGGCCCCCGGCGGTCACGGGGCAAATGGCGCGCATGACCTCgg                              >  2:526003/1‑101 (MQ=255)


                                                                         aaGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCCTGAcccccg                              >  2:2408107/1‑97 (MQ=255)


                                                                          aGCGCA.GCAGAGCCCAGCCCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGc                             <  1:2467351/101‑1 (MQ=255)


                                                                          aGCGCA.GCAGAGACCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGGCACGGGGCAAATGTCGCGCATGACCTCGGc                             >  1:2426586/1‑101 (MQ=255)


                                                                           gcgcA.CCAGGGGCCAGCCCCCGCCGGGGGGGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCg                            <  1:494508/101‑1 (MQ=17)


                                                                             gca.gcgGGGCCCAGCGCCCGCGGGGGGGGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGAt                          <  1:149046/101‑1 (MQ=17)


                                                                              ca.gcagAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATg                         >  1:2106160/1‑101 (MQ=255)


                                                                                ggcgggggCCAGCGCCCGCGGGGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATgg                        <  1:935122/95‑1 (MQ=17)


                                                                                  cagAGCCCGGCCCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGcc                      <  2:2173944/101‑1 (MQ=255)


                                                                                   aggggCCGGCGCCCGCGGGGGGGGGGGGGGGCGTTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCt                     <  1:3145244/98‑1 (MQ=17)


                                                                                    gagGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTc                    >  1:3412590/1‑101 (MQ=255)


                                                                                     ggcccggcgcCCGCGGGGGGGGGGGGGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCg                   <  1:3148830/95‑1 (MQ=14)


                                                                                         cggcgcCCGCCGGGGGGGGGCCGGCCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCa               <  2:723042/99‑1 (MQ=14)


                                                                                         cAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCa               <  2:2585991/101‑1 (MQ=255)


                                                                                          ggcgcCCGCCGAGGGGGGGGGGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaa              <  1:4184500/100‑1 (MQ=255)


                                                                                           gcgcCCGGCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaaa             <  2:2805191/101‑1 (MQ=255)


                                                                                           gcgcCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaaa             >  2:2247201/1‑101 (MQ=255)


                                                                                           gcccccgcgGGGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCaaa             <  1:3729327/98‑1 (MQ=255)


                                                                                                cgccgAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAggg        >  2:1445670/1‑101 (MQ=255)


                                                                                                   cgAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGGGGTCACGGGGCAAATGTCGCGCGCGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAg     >  1:3808256/1‑101 (MQ=255)


                                                                                                   cgAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAg     <  2:2778930/101‑1 (MQ=255)


                                                                                                    gAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAgg    >  2:3291694/1‑101 (MQ=255)


                                                                                                    gAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAgg    >  1:97132/1‑101 (MQ=255)


                                                                                                    gAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGGCAAAAAGGGCAgg    >  1:581961/1‑101 (MQ=255)


                                                                                                    gAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCGCGGCGATGGCTTCGGTCAAAAAGGGCAgg    >  2:2954532/1‑101 (MQ=255)


                                                                                                     ggggcggggcgGGCGTTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAggg   <  2:1916713/100‑1 (MQ=255)


GGATCGGGCGGAACAGGAAACGCATCGCGTTTCCCCGCCCGTCGCGCAACCGCCCGGCACGA.CCGTTTCCCCAAGCGCA.GCAGAGGCCAGCGCCCGCCGAGGGCGGGGCGGGCGCTGGCCGA.GGG.CCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAGGGG  >  NC_014034/1473310‑1473510

Base quality scores:


ATCG

< 3 ≤


ATCG

< 12 ≤


ATCG

< 20 ≤


ATCG

< 32 ≤


ATCG

< 40 ≤


ATCG