New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2185833 =79 (0.350)25 (0.110) 5/198 32.7 0.29 intergenic (+106/‑399) mtlK/RCAP_rcc02028 mannitol 2‑dehydrogenase/FeoA family protein
?NC_014034 = 2330174 41 (0.180)intergenic (+149/+163) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

TCACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCG.CCCC.GCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCC  >  NC_014034/2185734‑2185933
                                                                                                     |                                                                                                        
tcACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGTGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGGGCCGAGGCGACCCTGC..ggg                                                                                                         >  2:2276244/1‑101 (MQ=255)
tcACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCCGC..ggg                                                                                                         >  2:2016057/1‑101 (MQ=255)
 cccccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..gggg                                                                                                        <  1:2782720/99‑1 (MQ=255)
 cACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..gggg                                                                                                        <  2:4422794/101‑1 (MQ=255)
  ccccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..gtggg                                                                                                       <  2:837612/100‑1 (MQ=255)
  ccccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..ggggg                                                                                                       <  2:4018658/100‑1 (MQ=255)
   cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGc                                                                                                      <  2:2853047/101‑1 (MQ=255)
   cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGc                                                                                                      <  2:1975567/101‑1 (MQ=255)
   cccTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGc                                                                                                      <  1:692694/101‑1 (MQ=255)
      tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGG..ggggggggg                                                                                                   >  1:261533/1‑97 (MQ=255)
      tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.cc                                                                                                  <  2:1913089/101‑1 (MQ=255)
      tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.cc                                                                                                  <  1:1887526/101‑1 (MQ=255)
      tCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.cc                                                                                                  <  2:2440416/101‑1 (MQ=255)
      tCCGCCCCGGAACAGGCGCCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.cc                                                                                                  <  2:1648849/101‑1 (MQ=255)
      cccGCCCCGGACCCGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.cc                                                                                                  <  2:1334626/100‑1 (MQ=255)
       ccGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..ggggggcccc                                                                                                  >  1:3077528/1‑96 (MQ=255)
         gCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCG.cc                                                                                              <  1:2830816/101‑1 (MQ=255)
            ccGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCG.ccccc                                                                                           <  1:2436781/101‑2 (MQ=255)
             cGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGGG.GCG.cccccc                                                                                          >  2:4145332/1‑99 (MQ=255)
             cGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCG.cccccg                                                                                          <  2:3877003/101‑3 (MQ=255)
                  cAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCAccc                                                                                     <  2:3377848/101‑1 (MQ=255)
                    ggcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCAccccc                                                                                   <  1:2555353/101‑1 (MQ=255)
                     gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCAcccccg                                                                                  <  1:3285711/101‑2 (MQ=255)
                     gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCAcccccg                                                                                  <  1:4257584/101‑2 (MQ=255)
                     gcggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCAcccccg                                                                                  <  1:557377/101‑2 (MQ=255)
                       ggcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGGG.GCG.CCCC.CCCccccccccc                                                                               >  2:1933330/1‑98 (MQ=255)
                        gcCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCAcccccggcg                                                                               <  2:805735/101‑5 (MQ=255)
                             gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGCG.GGGGGGG.CCG.CCCC.CCCCCCCCCCGccgggt                                                                          >  2:319873/1‑96 (MQ=255)
                             gCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGGAttt                                                                         >  2:2888930/1‑101 (MQ=37)
                              ttccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTa                                                                        <  1:2073907/100‑1 (MQ=37)
                              ctccctccCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTa                                                                        <  2:225053/101‑1 (MQ=255)
                              ctccctccCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTa                                                                        <  1:1990407/101‑1 (MQ=255)
                               tccctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTAt                                                                       <  2:2022875/101‑1 (MQ=255)
                                ccctcccGGGCGGGGCCGCCTGATGTGCAAAGGGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATc                                                                      <  1:1286189/101‑1 (MQ=25)
                                 cctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATcc                                                                     <  1:3065749/101‑1 (MQ=255)
                                 cctcccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATcc                                                                     >  1:1734431/1‑101 (MQ=255)
                                     ccGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAg                                                                 <  1:1781537/101‑1 (MQ=255)
                                      cgggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGa                                                                <  2:697691/101‑1 (MQ=255)
                                       gggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGGT.CCC.CCCC.CCCCCCCCCGGCGCCTTTTTccccaaaa                                                               >  1:3658266/1‑96 (MQ=255)
                                        ggcgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGCATTTATCCCCAGaaa                                                              >  2:41047/1‑101 (MQ=25)
                                          cgggGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGaaaaa                                                            <  1:3124769/101‑1 (MQ=255)
                                           ggggCCGCCTGATGTGCAAAGCGGTTTCGCATCGGCGGTGCCGAGGCGACCCTGCG.GGGGGCC.CCC.CCCC.CCCCCCCCCGCGGCTTTTTTCCCAAAaaaaa                                                            >  2:2583137/1‑101 (MQ=255)
                                            gggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAagc                                                          <  1:2016186/101‑1 (MQ=255)
                                             ggCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAagca                                                         <  1:1508812/101‑1 (MQ=255)
                                                  ccTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGc                                                    <  1:1784125/101‑1 (MQ=255)
                                                   cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt                                                   >  2:1106948/1‑101 (MQ=255)
                                                   cTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCG.CCCC.CGCCCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCt                                                   <  1:64465/101‑1 (MQ=255)
                                                    tGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCtt                                                  <  2:4144781/101‑1 (MQ=255)
                                                        gtgCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.Gccc                                             <  1:639144/101‑1 (MQ=255)
                                                          gCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCg                                           <  2:261506/101‑1 (MQ=255)
                                                            aaaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGGC.CCG.CCCC.CCCCCCCCCGGCGGATTTATCCCCAGAAAAAACAGCGGCTTCGccccca                                          >  1:4253265/1‑99 (MQ=255)
                                                             aaGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAg                                        <  2:3113970/101‑1 (MQ=255)
                                                                cGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGcc                                     <  1:4225437/101‑1 (MQ=255)
                                                                cGGTTTCGCCGCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGcc                                     <  2:2243179/101‑1 (MQ=37)
                                                                   tttCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.Tccccccagggcctt                                  >  1:3885566/1‑91 (MQ=21)
                                                                      cGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTGttt                               <  2:1924428/101‑1 (MQ=255)
                                                                       gCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTGtttt                              <  2:2471362/101‑1 (MQ=255)
                                                                        ccTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTGttttg                             <  2:1553172/101‑2 (MQ=37)
                                                                          tCGGCGGTGCCGAGGCGACCCTGCGGGGGGGCC.CCC.CCCC.CCCCCCCCCCGCGGTTTTTTCCAAAAAAAAAAAAGGGGTTT.CCCCCCCGGCCCTTGttttt                             >  2:2844254/1‑101 (MQ=255)
                                                                              cggTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGca                      <  2:166896/101‑1 (MQ=37)
                                                                              cggTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGca                      <  1:2978375/101‑1 (MQ=37)
                                                                                gTGCCGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGcaca                    <  1:2327872/101‑1 (MQ=37)
                                                                                  gCCGAGGCGCCCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAg                  <  1:403761/101‑1 (MQ=25)
                                                                                   cctgtgCGTCCTTGC..GGGGGCTCCCC.CCCC.GCA.CCCCCGGCTTATTTATCCCAAGTAAATGCAGCGGCTT.GCCCCTAAGGCCTTG.TTTTGATGGCACAAGa                 <  2:3569230/96‑1 (MQ=16)
                                                                                    cGAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGaa                <  1:2699962/101‑1 (MQ=37)
                                                                                     gAGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGaaa               <  1:4188859/101‑1 (MQ=37)
                                                                                      aGGCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAAc              <  2:2249634/101‑1 (MQ=37)
                                                                                        gCGTCCATGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGc            <  1:736742/101‑1 (MQ=25)
                                                                                        gCGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGc            <  2:1172199/101‑1 (MQ=37)
                                                                                         cGACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGcc           <  1:423110/101‑1 (MQ=37)
                                                                                          gACCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCg          <  2:287363/101‑1 (MQ=37)
                                                                                           aCCCTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGa         <  2:898529/101‑1 (MQ=37)
                                                                                            cccTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAATCGCCGaa        <  2:917415/101‑1 (MQ=25)
                                                                                            cccTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGaa        <  1:505184/101‑1 (MQ=37)
                                                                                              cTGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCCTG.TTTTGATGGGACAAGAAAAGCCGaaac      >  2:3504476/1‑99 (MQ=21)
                                                                                               tGC..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGGAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCg     <  2:1059854/101‑1 (MQ=25)
                                                                                                gC..GGGGGCT.CCG.CCCCAGCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGc    >  2:1030281/1‑101 (MQ=37)
                                                                                                 c..GGGGGCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGACGAACCGcc   >  2:778582/1‑101 (MQ=25)
                                                                                                    gggggCT.CCGCCCCC.GCA.CCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTG.TTTTGATGGCACAAGAAACGCCGAACCGccc  <  1:2844461/101‑1 (MQ=37)
                                                                                                     |                                                                                                        
TCACCCTCCGCCCCGGAACAGGCGGCCCCGCTCCCTCCCGGGCGGGGCCGCCTGATGTGCAAAGCGGTTTCGCCTCGGCGGTGCCGAGGCGACCCTGC..GGGGGCT.CCG.CCCC.GCACCCCCCGGCGTATTTATCCCAAGAAAAAGCAGCGGCTT.GCCCCGAAGGCCTTGTTTTTGATGGCACAAGAAACGCCGAACCGCCC  >  NC_014034/2185734‑2185933

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG