New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1103359 =93 (0.410)51 (0.230) 9/200 29.4 0.45 intergenic (‑359/+59) ugpB/regA2 sn‑glycerol‑3‑phosphate‑binding periplasmic protein ugpB/photosynthetic apparatus regulatory protein RegA
?NC_014034 = 2330175 30 (0.130)intergenic (+150/+162) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

TGCGCCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTCGCCCGC  >  NC_014034/1103259‑1103459
                                                                                                       |                                                                                                      
tGCGCCCCGGGAGGCAGGCGGACTGGCGCCGCGACGGAGGGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGGGAGccg.gc..g                                                                                                        >  2:721456/1‑101 (MQ=38)
tGCGCCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATccg.cc..g                                                                                                        <  1:2979222/101‑1 (MQ=255)
tGCGCCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATccg.cc..g                                                                                                        <  2:1962625/101‑1 (MQ=255)
 gcgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..gg                                                                                                       <  2:3935247/101‑1 (MQ=255)
  cgcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..ggg                                                                                                      <  2:1490082/101‑1 (MQ=255)
   gcCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..gggg                                                                                                     <  2:2403426/101‑1 (MQ=255)
       cGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCGCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTc                                                                                                <  2:2521133/101‑1 (MQ=255)
           aggcaggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTTCGcc                                                                                            >  2:1772889/1‑101 (MQ=255)
             gcaggcGGACCGGCGCCGCGATGGAGAGGGCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGcccc                                                                                          <  2:437511/101‑1 (MQ=255)
              cgggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGccccc                                                                                         <  2:2348713/99‑1 (MQ=255)
               gggcGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCg                                                                                        <  1:1618123/100‑1 (MQ=255)
                     gccGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGAcccc                                                                                  <  2:1345177/100‑1 (MQ=255)
                      ccGGCGGCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGGGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGAccccc                                                                                 <  1:2458096/101‑1 (MQ=255)
                      ccGGCGCGGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGAccccc                                                                                 <  2:3958731/101‑1 (MQ=255)
                      ccGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGCccccc                                                                                 >  2:2443804/1‑101 (MQ=255)
                      ccGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGAccccc                                                                                 <  1:1871946/101‑1 (MQ=255)
                      ccGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGAccccc                                                                                 <  1:329545/101‑1 (MQ=255)
                       cGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCg                                                                                <  1:2247187/101‑1 (MQ=255)
                       cGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCg                                                                                <  2:2384623/101‑1 (MQ=255)
                       cGGCCCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCg                                                                                <  1:4211957/101‑1 (MQ=255)
                        ggCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCg.g                                                                              <  1:3944564/101‑1 (MQ=255)
                        ggCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCg.g                                                                              <  2:2893570/101‑1 (MQ=255)
                        ggCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCg.g                                                                              <  2:2511232/101‑1 (MQ=255)
                         gcgcCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.Gc                                                                             <  2:3783217/101‑1 (MQ=255)
                         agtacgggACGGAGGGGACGGAAGGCGGGGGGGACCTCGGGGGGATTTCGGCCCGCGGCCGGGCGGGGAACCG.GC..GGGGG.CTCCGCCCCCCGGCCCCCG.Gc                                                                             <  2:4367579/94‑1 (MQ=12)
                          cgccgcGACGGAGAGGTCCGAACGCGGGGTGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCg                                                                            <  2:740202/101‑1 (MQ=255)
                          cgccgcGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCg                                                                            <  2:992952/101‑1 (MQ=255)
                          cgccgcGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..CGGGG.CTCCCCCCCCCGGCCCCCG.GCg                                                                            >  2:215218/1‑101 (MQ=37)
                           gccgcGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGt                                                                           <  1:1142560/101‑1 (MQ=255)
                              gcgACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTAtt                                                                        <  2:51995/101‑1 (MQ=255)
                               cgACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTAttt                                                                       <  2:182162/101‑1 (MQ=255)
                                gACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTg                                                                      <  1:216652/101‑1 (MQ=255)
                                gACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CGCCGGCCCCGGACCCCCG.GCGtgattg                                                                      >  2:1910774/1‑96 (MQ=255)
                                 aCGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGGATTTgg                                                                     >  2:2522753/1‑101 (MQ=255)
                                     agagGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.GTCCGCCCCCGGGCCCCCG.CCGCGTTTTGGccc                                                                 >  1:4445811/1‑100 (MQ=21)
                                     agagGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.GGCCGCCCCCCGCACCCCG.CCGGATTTTGGccc                                                                 >  2:139068/1‑100 (MQ=21)
                                      gagGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGAGCGGCCGCGCGGCGATCCG.CC..CGGCG.GTCCGCCCCCGGACCCCCG.GCCCAGTTGGGccca                                                                >  1:683756/1‑99 (MQ=21)
                                       agGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAg                                                               <  2:194115/101‑1 (MQ=255)
                                       agGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAg                                                               <  1:3657714/101‑1 (MQ=255)
                                        ggTCCGACCGGGGGGGGCGAGGCGGGGCAATTCCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGa                                                              <  2:948258/101‑1 (MQ=14)
                                        ggTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCC..GGGGG.GCCCCCCCCCGGCCCCCCGCGCGT.TTTGGGCCaga                                                               >  1:1688007/1‑99 (MQ=21)
                                         gTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGaa                                                             <  1:198766/101‑1 (MQ=255)
                                          tCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCCGGCCCCCG.GCGTCTTTTGGCCAAGaaa                                                            >  2:1042978/1‑101 (MQ=21)
                                            cGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGaaaaa                                                          <  2:4194569/101‑1 (MQ=255)
                                            cGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGaaaaa                                                          <  2:98016/101‑1 (MQ=255)
                                             gAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGaaaaaa                                                         >  1:2756466/1‑101 (MQ=255)
                                             gAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCCGACCCCCG.GCGCATTTGGGCCAAGaaaaaa                                                         >  1:2165398/1‑101 (MQ=255)
                                             gAACGCGGGGGGCGCCTCCGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..CGGGG.CCCCCCCCCCCGACCGCCG.GCGTACTTGGGGCAAGaaagaa                                                         >  2:2062921/1‑101 (MQ=18)
                                              ggcgcgGCGGGCACGTCGGGGCGATTTCTCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAAc                                                        <  2:3814882/99‑1 (MQ=17)
                                               aCGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCC..GGGGG.CCCCCCCCCCGGCCCCCCG.CCGATTTTGGGCC.AGAAAAAACg                                                       >  2:4139085/1‑101 (MQ=18)
                                               aCGCGGCGGGCGCCTCGGGGCGTTTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACg                                                       <  1:721536/101‑1 (MQ=255)
                                                   ggggggCGCCGCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACggggg                                                   <  2:281191/101‑1 (MQ=255)
                                                    gggggCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGc                                                  <  2:3318669/101‑1 (MQ=255)
                                                    gggggCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGGATTTGGGCCAAGAAAAAACGGGGGc                                                  >  2:4398337/1‑101 (MQ=255)
                                                     ggggCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCC..GGGGGTCCCCCCCCCCGCCCCCCCC.GCGCTTTGGGGCAAAAAAAAAAAggggc                                                   >  1:3133091/1‑100 (MQ=12)
                                                      gggCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCg                                                <  2:2667242/101‑1 (MQ=255)
                                                       ggCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCgg                                               <  1:4139345/101‑1 (MQ=255)
                                                           ccTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGAt                                           <  2:382109/101‑1 (MQ=255)
                                                           ccTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGAt                                           <  1:1715411/101‑1 (MQ=255)
                                                           ccTCGGGGCGATTCCGCCGCGCGGCCGCGCGGGGATCCG.CG..GGGGG.CTCCGCGCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGAt                                           <  2:4415759/101‑1 (MQ=17)
                                                            cTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATc                                          <  2:2071665/101‑1 (MQ=255)
                                                              cGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CCCGGGGGG.CCCCCCCCCCGCCCCCCCC.GC.CATTTGGGCCCGAAAAAAACGGGGGGGgggggcgg                                         >  1:2324798/1‑97 (MQ=9)
                                                              cGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGGTCAg                                        >  2:1922196/1‑101 (MQ=255)
                                                              cGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAg                                        <  2:1214590/101‑1 (MQ=255)
                                                                gggCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTc                                      <  2:994185/101‑1 (MQ=255)
                                                                  gCGATTTCGCCGCGCGGCCGCGCGGCGATCCGCCC..GGGGG.GGCGCCCCCCCGCCCCCCG.CGGGTTTTGGGCCAGAAAAAAACGGGGGCCgggggcaggccc                                     >  2:2351449/1‑93 (MQ=9)
                                                                   cGATTTCGCCGGGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTc                                   <  1:513800/101‑1 (MQ=255)
                                                                   cGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTc                                   <  1:4108201/101‑1 (MQ=255)
                                                                    gATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCg                                  <  2:2908268/101‑1 (MQ=255)
                                                                      tttCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGaa                                >  2:2595184/1‑101 (MQ=255)
                                                                      tttCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGaa                                <  1:1910898/101‑1 (MQ=255)
                                                                         cgccgcGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATc                             <  1:448681/101‑1 (MQ=255)
                                                                          gccgcgcggccgcgcgGCGATCCG.CT..GGGGG.CCCCCCCCCCCTGGCCGCC.GCGTATTTGGGCCCAAAAAAAAAGGGGGCCGGGGGACAGGCCTCGGAATCg                            >  1:738511/1‑101 (MQ=9)
                                                                            cgcgcggccgcgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGAt                          <  2:2111515/101‑1 (MQ=255)
                                                                             gcgcggccgcgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATc                         <  1:3609007/101‑1 (MQ=255)
                                                                                 ggccgcgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATgc                     <  2:2145670/101‑1 (MQ=255)
                                                                                   ccgcgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATgccg                   <  1:3023824/101‑1 (MQ=255)
                                                                                     gcgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATgccgcc                 <  2:456778/101‑1 (MQ=255)
                                                                                      cgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGccc                <  1:2717832/101‑1 (MQ=255)
                                                                                      cgcggcGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGccc                <  2:1135554/101‑1 (MQ=255)
                                                                                       gcggcgATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGTATCAGTCCTCGAAATCGATCATGCCGCCCa               <  2:2165259/101‑1 (MQ=255)
                                                                                       gcggcgATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCa               <  1:1773008/101‑1 (MQ=255)
                                                                                        cggcgATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAg              <  1:3119871/101‑1 (MQ=255)
                                                                                         ggcgATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAgg             <  2:1516788/101‑1 (MQ=255)
                                                                                            gATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCt          <  2:2324648/101‑1 (MQ=255)
                                                                                             aTCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCtt         <  1:232047/101‑1 (MQ=255)
                                                                                              tCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGCATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCCGTCCTCGAAATCGATCATGCCGCCCAGGTCTTc        >  2:3239382/1‑101 (MQ=255)
                                                                                               ccg.cc..gGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcg       <  2:4445539/101‑1 (MQ=255)
                                                                                               ccg.cc..gGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcg       >  1:4146852/1‑101 (MQ=255)
                                                                                               ccg.cc..gGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcg       <  2:2025106/101‑1 (MQ=255)
                                                                                                   cc..gGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgccc    <  2:2254177/101‑1 (MQ=255)
                                                                                                   cc..gGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgccc    <  1:1120787/101‑1 (MQ=255)
                                                                                                    c..gGGGG.CTCCGCCCCCCGACCCCCG.TCGTATTTGGGCCAAGAAAAAACCGGGTCCGGGCATCGGTCCTCGAAATCGATCATGCCGCTCAGGTCTTcgaccg   <  2:33272/101‑1 (MQ=21)
                                                                                                       ggggg.CTCCGCCCCCGGACCCCCG.GCGTATTTGGTCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgcccgc  >  1:2585149/1‑101 (MQ=255)
                                                                                                       ggggg.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTcgcccgc  >  2:1238250/1‑101 (MQ=255)
                                                                                                       |                                                                                                      
TGCGCCCCGGGAGGCAGGCGGACCGGCGCCGCGACGGAGAGGTCCGAACGCGGGGGGCGCCTCGGGGCGATTTCGCCGCGCGGCCGCGCGGCGATCCG.CC..GGGGG.CTCCGCCCCCGGACCCCCG.GCGTATTTGGGCCAAGAAAAAACGGGGGCCGGGGATCAGTCCTCGAAATCGATCATGCCGCCCAGGTCTTCGCCCGC  >  NC_014034/1103259‑1103459

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG