BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1639998	77 (0.430)	76 (0.420)	15/160	21.1	0.66	intergenic (+78/‑67)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	= 2600949	0 (0.000)	76 (0.420)	15/160	21.1	0.66	intergenic (+11/‑130)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 119 total aligned reads displayed.


CTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....G.....G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639899‑1640088


 ttagggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAGAT.GAAAACCATCCCTTTCCTCTTTCCCCCAAAATT.CCCGGGGGGc                                                                                                               >  1:2553102/4‑101 (MQ=255)


 ttCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGCAAAAT.GAAAACCATCCCCCTCCTC.TTTTCCCCAAAAT.CCCgcgggggc                                                                                                              >  2:2279705/1‑99 (MQ=255)


 ttCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGcc                                                                                                              <  2:1738522/101‑1 (MQ=255)


  tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGCAGATGGAAACCAACCCCTTTCTTT.TTTCCCCAAAAAT.CCCGGGGGGcc                                                                                                              >  2:3082218/1‑101 (MQ=255)


  tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGccc                                                                                                             <  1:1163941/101‑1 (MQ=255)


  tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGccc                                                                                                             <  1:700589/101‑1 (MQ=255)


  tCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGccc                                                                                                             <  2:2464649/101‑1 (MQ=255)


   cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGGGCAAGAT.GAAAACCATCCCCTTCATC.TTTCCCCCAAAAT.CCCCGGGGGGCCg                                                                                                            >  2:3914679/1‑101 (MQ=37)


   cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAACCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCg                                                                                                            <  1:3161181/101‑1 (MQ=255)


    gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCgg                                                                                                           <  1:1404748/101‑1 (MQ=255)


     ggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGAAGAA.GAAAACCACCCCCTTCTTC.TTTCCCCCAAAATCCCCGGGGGGCCCgg                                                                                                           >  1:1859235/1‑101 (MQ=255)


     ggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTGGGGGGAAAT.GAAAACCACACCTTTCATC.TTTCCCCCAATAT.CCCGGGGGGGCCcgg                                                                                                          >  1:4166260/1‑101 (MQ=255)


      gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGGAAGAT.GAAAACCATCCCTTTCATC.TTTCCCCCAAAATCCCCGGGGGGCCCggg                                                                                                          >  1:1161350/1‑101 (MQ=37)


      gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAACCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g                                                                                                     <  2:3138880/101‑1 (MQ=255)


      gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g                                                                                                     <  2:164450/101‑1 (MQ=255)


       aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGCAAGAT.GAAAACCCTCCCCTTTATC.TTTCCCCAAAAAT.TCCGGGGGGGCCggg....g.....g                                                                                               >  1:2901682/1‑101 (MQ=21)


       aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTTTGGGGAAAAA.GAAACCCACCCCTTTCCTC.TTTCCCCCAATAT.CCCCGGGGGCCCcgg....g.....g                                                                                               >  1:1690861/1‑101 (MQ=255)


       aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....g                                                                                               <  1:3938450/101‑1 (MQ=255)


       aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....g                                                                                               <  2:1566726/101‑1 (MQ=255)


        tCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....gg                                                                                              <  2:2769765/101‑2 (MQ=255)


         cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTTGGGGAAAAA.GAAACCCATCCCTTTCATC.TTTCCCCCAAAAT.CCCCGGGGGCCCcgg....g.....ggg                                                                                             >  1:2992017/1‑99 (MQ=255)


         cTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggc                                                                                             <  2:1127864/101‑3 (MQ=255)


          ttCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggca                                                                                            <  2:122781/101‑4 (MQ=255)


          tgccGGATGGGACTTTCGATGCCTCCGGCGGGGATATTGGGGGCAAGAT.GAAACCCACCCCTTTCATC.TGGCCCCAAATAG.CCCGGGGGGCCCggg....g.....ggca                                                                                            <  2:944601/99‑4 (MQ=37)


           tCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGGGGAAGAA.GAAAACCACCCCCTTCATC.TTTTCCCAAACAT.CCCCCGGGGGCCgcgcggggg                                                                                                    >  1:874274/1‑93 (MQ=255)


            ccGGATGTTACTTTCGATGCCTCCGGCGGTAATATTTGGGGCAAGAT.GAAACCCTTCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggcagc                                                                                          <  2:1534906/101‑6 (MQ=25)


            ccGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGGGGGAGAA.GAAAACCATCCCCTTCATC.TTTCCCCCAATAT.CCCCGGGGGCCCggg....g.....gggagc                                                                                          >  2:924695/1‑96 (MQ=255)


            ccGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggcagc                                                                                          <  1:376046/101‑6 (MQ=255)


            ccGGATGTGACTTTCGATGCCTCCGGCGGGGAAATTTTGGGCAAAAA.GAAAACCACCCCTTTTATC.TTTCCCCCAAAAT.CCCCGGGGGCCCggg....g.....gggagg                                                                                          >  1:1374570/1‑96 (MQ=255)


             cGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTTTGGGCAAGAT.GAAACCCATCCCTTTCATC.TTTCCCCCAATAT.CCCCGGGGGGCCggg....g.....gggaggg                                                                                         >  1:1367492/1‑95 (MQ=25)


              ggATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggcagcgc                                                                                        <  1:1754478/101‑8 (MQ=255)


                aTGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggcagcgccc                                                                                      <  1:1745207/101‑10 (MQ=255)


                 tgtgACTTTCGATGCCTCCGGCGGGGGAATTTTGGGGAAGAT.GAAACCCCTCCCTTTTATC.TTTCCCCCAACATCCCCGGGGGGCCCggg....g.....gggggggccc                                                                                      >  1:3587020/1‑92 (MQ=19)


                 tgtgACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCggg....g.....ggcagcgcccc                                                                                     <  1:1328266/101‑11 (MQ=255)


                   tgACTTTCGATGCCTCCGGCGGGGAAATTTTGGGCAAGAT.GACACCCATCCCTTTCTTC.TTTTTCCAAATAT.CCCGCGGGGCCCGGG....G.....g.....c..gagggcccccc                                                                            >  2:2181106/1‑91 (MQ=25)


                          cgagccccccGGGGGGGATATTGGGGGAAAGAT.AAACCCCATCCCTTTCATC.TTGCCCAAAATAC.CCGGGGGGGCCGGGG....GGGCA.G.....C..G....CCCCCCGCCACtt                                                                     <  2:2552939/93‑1 (MQ=2)


                              gCCTCCGGCGGGGGTATTTGGGGCAAAAT.GGAACCCATCCCCTTAATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGGGGGCG.....G.....C..G....CCCCCCGCCACTTCCGc                                                                 >  2:1036846/1‑101 (MQ=18)


                                  ccGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACg                                                             >  2:2502061/1‑101 (MQ=21)


                                      cggGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGc                                                         >  2:3046532/1‑101 (MQ=25)


                                      cggGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGc                                                         >  2:2889035/1‑101 (MQ=25)


                                      cggGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGc                                                         >  2:1605325/1‑101 (MQ=25)


                                       ggggATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCa                                                        >  2:3061947/1‑101 (MQ=25)


                                       ggggATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCa                                                        >  2:3225294/1‑101 (MQ=25)


                                       ggggATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCa                                                        >  1:361981/1‑101 (MQ=25)


                                        gggATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAg                                                       >  1:2493058/1‑101 (MQ=21)


                                         ggATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAgc                                                      >  2:1327615/1‑101 (MQ=25)


                                          gATTTTTGGGGCAAGAA.GAACCCCATCCCTTTCCTC.TCCCCCCAAATTG.CCGGGGGGGCCGGGG....G.....GGC...C..GCC..CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                     <  1:1286414/101‑1 (MQ=255)


                                          gATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:134956/1‑101 (MQ=25)


                                          gATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAgcg                                                     >  1:2499140/1‑101 (MQ=25)


                                            tatTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGcc                                                   >  2:34941/1‑101 (MQ=25)


                                            tatTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGCGGCAGCGcc                                                   >  2:2289237/1‑101 (MQ=21)


                                             atTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                  >  1:1050663/1‑101 (MQ=25)


                                              tttGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 >  2:585541/1‑101 (MQ=21)


                                              tttGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                 >  2:170794/1‑101 (MQ=25)


                                               ttGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg                                                >  1:1110828/1‑101 (MQ=21)


                                                   ggCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCg                                            >  1:1918563/1‑101 (MQ=25)


                                                     cAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          >  2:2376427/1‑101 (MQ=25)


                                                      aaGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                         >  2:928793/1‑101 (MQ=25)


                                                       aaagataaaCCCCTCCCTTTCCTT.CTCCCCCAAACTC.CCGGGGGGGCCCGGG....G.....GGGCCCC..C....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                          <  2:3548955/95‑1 (MQ=255)


                                                       aGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                        >  1:307894/1‑101 (MQ=25)


                                                         gacgacccccACCCTTTTCACC.TCCCCCAAAAGAC.CCGGGGGGGCCGGGG....G.....G.....C..CCCCCCCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                       <  2:414290/94‑1 (MQ=255)


                                                            aaccccccccccTTTC.TC.TTGCCCAAAATTG.CCGGGGGGGCCGGGG....G.....GGGCCCC..C....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                    <  2:1156847/92‑1 (MQ=255)


                                                             aaaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                   >  1:666993/1‑101 (MQ=25)


                                                              aaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGTGGCAGCGCCCCCGCCGTTGACGAAgg                                  >  2:2972586/1‑101 (MQ=18)


                                                              aaCCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                  >  2:3182954/1‑101 (MQ=25)


                                                                 ccctCCCTTTTCTC.CTTCCCCAAAATG.CCCGGGGGGCCCGGG....G.....GGGC..C..GCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                <  1:3708423/98‑1 (MQ=255)


                                                                  cgtctttttCACC.TTGGCCCAAATAG.CCCGGGGCTCGGGGG....G.....G.....CCAGCC..CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                              <  2:576590/95‑1 (MQ=255)


                                                                  cctCCCTTTCCTT.CTGCCCCAAATTC.CCCGGGGGGCCGGGG....G.....GGC...C..GCCC.CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                               <  1:4327197/99‑1 (MQ=255)


                                                                  cATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCCGCCGTTGACGAAGgaggc                              >  1:3769237/1‑99 (MQ=21)


                                                                   aTCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                             >  1:996336/1‑101 (MQ=25)


                                                                    cccttttCCTC.TCCCCCCAAATCC.CCGGGGGGGCCGGGG....G.....GGCAC.C..C....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                            <  1:1395202/97‑1 (MQ=255)


                                                                       cTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                         >  1:4185411/1‑101 (MQ=25)


                                                                        tttCGTC.TTGCCCCAAATA..CCGGGGGGGCCGGGG....GGGGCAG.....C..C....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        <  2:2991796/101‑1 (MQ=255)


                                                                        tttCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                        >  2:2949176/1‑101 (MQ=25)


                                                                         ttCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                       >  2:1132183/1‑101 (MQ=25)


                                                                            aTC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  2:650917/1‑101 (MQ=25)


                                                                            aTC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  2:3199038/1‑101 (MQ=25)


                                                                            aTC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                    >  1:2541996/1‑101 (MQ=25)


                                                                             tC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   >  1:3410791/1‑101 (MQ=25)


                                                                             tC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   >  2:1831399/1‑101 (MQ=25)


                                                                              c.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                  >  2:1631071/1‑101 (MQ=25)


                                                                              c.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                  >  2:473330/1‑101 (MQ=25)


                                                                              c.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCCGTGACGGAGGGGGCCCCGCTGTTTCa                  >  2:841184/1‑101 (MQ=16)


                                                                              c.TTCCCCCAAATTC.CCGGGGGGGCCCGGG....G.....GGCCCCC..C....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                   <  1:3695515/101‑1 (MQ=255)


                                                                                ttGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGGGACCGCGATGTTTCaa                 >  2:884845/1‑101 (MQ=25)


                                                                                ttGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                 >  2:309034/1‑101 (MQ=25)


                                                                                 tGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                >  1:4352643/1‑101 (MQ=25)


                                                                                 tGCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCAGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                >  1:1886487/1‑101 (MQ=25)


                                                                                  gCCCCAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa               >  1:1805490/1‑101 (MQ=25)


                                                                                   ccccAGATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaaa              >  1:865870/1‑100 (MQ=25)


                                                                                   ccccAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg              >  2:2437084/1‑101 (MQ=25)


                                                                                    cccAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa             >  1:4190192/1‑101 (MQ=25)


                                                                                      cAAATAT.CCCGGGGGGCCCGGG....GGGGA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  2:3054581/1‑101 (MQ=37)


                                                                                      cAAATAT.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc           >  2:4001707/1‑101 (MQ=25)


                                                                                         atat.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg        >  1:3411153/1‑101 (MQ=37)


                                                                                           at.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt      >  1:4387768/1‑101 (MQ=37)


                                                                                           at.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGCCCGTTGTCGAAGGAGACCGCGCTGTTCTAAAAGATCCTGac      >  1:3907891/1‑100 (MQ=21)


                                                                                            t.CCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc     >  2:1498276/1‑101 (MQ=37)


                                                                                               ccGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc   >  1:2873755/1‑101 (MQ=37)


                                                                                                cGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc  >  2:496413/1‑101 (MQ=37)


CTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGGGCAAGAT.GAAACCCATCCCTTTCATC.TTGCCCCAAATAT.CCCGGGGGGCCCGGG....G.....G.....C..G....CCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCC  >  NC_014034/1639899‑1640088

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG