BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 408473	117 (0.630)	81 (0.440)	35/164	12.2	0.58	intergenic (+91/+57)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 2600949	0 (0.000)	81 (0.440)	35/164	12.2	0.58	intergenic (+11/‑130)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 146 total aligned reads displayed.


AACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCG  >  NC_014034/408374‑408569


aaCGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.TCGGGAAGAAGAAACCGATGTCCTTCCTCTTTCCCCAAA.AATCCCCGGGGGGgg                                                                                                            >  1:1064446/1‑101 (MQ=21)


   gTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCtt                                                                                                         <  1:1452179/101‑1 (MQ=255)


    tCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTg                                                                                                        <  1:271960/101‑1 (MQ=255)


     cTGAGAGGCTGGGGGCTCTGCCCCCCGACCCCCGGGAT.ATTT.GCGGGAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCCGGGGGGGGCGTGc                                                                                                       >  1:683725/1‑101 (MQ=21)


      tGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCCGGAT.ATTT.GCGGCAAGATGAAGCCGATGGCCTTCCTCTTGCCCCCAA.TATCCCCGGGGGAGGCGTggt                                                                                                      >  2:2950483/1‑99 (MQ=21)


       gagaGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTg                                                                                                     <  1:4087866/101‑1 (MQ=255)


        agagGCTGGGGGGTCTGCCCCCCGACCCCCCGGGT.ATTT.TCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCCAA.AATCCCCGGGGGAGGGTTGCTGa                                                                                                    >  2:4227161/1‑101 (MQ=25)


          agGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGaaa                                                                                                  >  1:1442422/1‑101 (MQ=255)


            gCTGGGGGCTCTGCCCCCAGACCCCCGGGGTAATTT.GGGGCAGGAGAAACCCGAT.TTCTTCATCCTTCCCCAAATTATCCCGGGGGGCGGCTGGCGGaaac                                                                                                 >  2:3192627/1‑100 (MQ=9)


            gCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGc                                                                                                >  1:3941320/1‑101 (MQ=255)


              tGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaa                                                                                              >  2:1888375/1‑101 (MQ=255)


              tGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaa                                                                                              >  2:4414898/1‑101 (MQ=255)


              gggggcCCCTCCCCCCAGACCCCGGGTAT.TTTG.GGGGCAAGAGAAAGCCGATTTCCTTCATTTTGCCGAAAA.TTTCCCGGGGGGAGGCTTGCTGAAAGCaa                                                                                              <  1:1026399/100‑1 (MQ=255)


               gggggCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaag                                                                                             >  1:2490310/1‑100 (MQ=255)


               gggggCTC.ACCCCCTGGCCCCCGGGGT.TTTTGGTGGCAAGATGAAGCCGATTTCCTTCATTTTGCCGAAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaag                                                                                             <  1:3847920/101‑2 (MQ=16)


                ggggCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaaga                                                                                            >  2:2301447/1‑99 (MQ=255)


                 gggCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaagac                                                                                           <  2:3045127/101‑4 (MQ=255)


                  ggCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGGAAGAaaaaag                                                                                          >  1:2353833/1‑98 (MQ=255)


                     tctGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACgggg                                                                                      >  1:2402885/1‑101 (MQ=255)


                      ctGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg                                                                                     >  1:386994/1‑101 (MQ=255)


                        gCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                              >  2:2845506/1‑101 (MQ=255)


                        ccccccAGCCCCCGGGGAT.TTTG.GCGGAAAGATGAACCCGATGTCCTTCATCTTGCCGAAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gc                                                                              <  2:2228571/100‑1 (MQ=25)


                         cccccAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gca                                                                             <  1:1348590/101‑2 (MQ=255)


                          ccccAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcag                                                                            >  1:4414609/1‑99 (MQ=255)


                          ccccAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcag                                                                            <  2:2684992/101‑3 (MQ=255)


                           cccAGACCCCGGGGAT.ATTT.GGGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcaga                                                                           <  1:4435016/101‑4 (MQ=25)


                            ccAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagag                                                                          >  2:1700875/1‑97 (MQ=255)


                            ccAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagag                                                                          <  2:4234465/101‑5 (MQ=255)


                             cAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagc                                                                         <  2:2490147/101‑6 (MQ=255)


                             cAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagc                                                                         <  2:4019496/101‑6 (MQ=255)


                               gACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagagccc                                                                       <  2:2663694/101‑8 (MQ=25)


                                aCCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....Gcagcgtccc                                                                      >  2:1424686/1‑93 (MQ=25)


                                               t.GCGGCAAGAGGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGcc                                                       <  2:491217/101‑1 (MQ=18)


                                                 gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCa                                                      >  2:537136/1‑101 (MQ=21)


                                                    gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCaaaa                                                   >  2:3443726/1‑101 (MQ=21)


                                                      aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAgg                                                 >  2:2068729/1‑101 (MQ=21)


                                                       aGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGga                                                <  2:1837096/101‑1 (MQ=21)


                                                        gATAAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgac                                               <  1:1234996/101‑1 (MQ=18)


                                                         aTGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgacc                                              >  1:1156226/1‑101 (MQ=21)


                                                         aTGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgacc                                              <  2:4139898/101‑1 (MQ=21)


                                                          tGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccg                                             <  1:2594633/101‑1 (MQ=21)


                                                          tGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccg                                             <  2:1388660/101‑1 (MQ=21)


                                                           gAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccga                                            >  1:1645602/1‑101 (MQ=21)


                                                           gAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccga                                            >  2:2331352/1‑101 (MQ=21)


                                                           gAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccga                                            >  1:96501/1‑101 (MQ=21)


                                                            aaGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGgaccgac                                           >  1:563762/1‑101 (MQ=21)


                                                              gCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACAGACCt                                         >  2:1339261/1‑101 (MQ=18)


                                                               ccGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTc                                        <  2:3291327/101‑1 (MQ=21)


                                                                cGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCa                                       <  2:2251903/101‑1 (MQ=21)


                                                                cGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCa                                       <  2:2041322/101‑1 (MQ=21)


                                                                 gATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCGAAAAGGACCGACCTCAg                                      >  2:4014915/1‑101 (MQ=18)


                                                                 gATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAg                                      >  1:3199251/1‑101 (MQ=21)


                                                                   tGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                    >  1:3319484/1‑101 (MQ=21)


                                                                    gTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                   <  2:3783/101‑1 (MQ=21)


                                                                    gTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                   >  1:3186489/1‑101 (MQ=21)


                                                                     tCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                  >  2:2849959/1‑101 (MQ=21)


                                                                     tCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                  >  1:1849518/1‑101 (MQ=21)


                                                                     tCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                  >  2:129135/1‑101 (MQ=21)


                                                                     tCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                  <  1:1831113/101‑1 (MQ=21)


                                                                      ccTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg                                 >  2:1853000/1‑101 (MQ=21)


                                                                      ccTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGGCGCCAAAAGGACCGACCTCAGATccg                                 >  1:2383108/1‑99 (MQ=18)


                                                                       cTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                                >  1:665178/1‑101 (MQ=21)


                                                                       cTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                                >  1:1371001/1‑101 (MQ=21)


                                                                       cTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                                >  2:2111752/1‑101 (MQ=21)


                                                                       cTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                                >  2:4356696/1‑101 (MQ=21)


                                                                       cTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGG.....GCAGAGACCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                                >  2:1988322/1‑101 (MQ=21)


                                                                        ttCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGcc                               <  2:1838755/101‑1 (MQ=21)


                                                                         tCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                              >  1:2442045/1‑101 (MQ=21)


                                                                         tCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                              <  1:4154338/101‑1 (MQ=21)


                                                                         tCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGccc                              <  2:1550886/101‑1 (MQ=21)


                                                                             cTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                          >  2:4164361/1‑101 (MQ=25)


                                                                             cTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                          >  2:1159957/1‑101 (MQ=25)


                                                                               tGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg                        >  2:191748/1‑101 (MQ=25)


                                                                               tGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg                        >  1:1867594/1‑101 (MQ=25)


                                                                               tGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtg                        >  1:3501644/1‑101 (MQ=25)


                                                                                gCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                       >  2:2995325/1‑101 (MQ=25)


                                                                                gCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                       >  1:1654988/1‑101 (MQ=25)


                                                                                 cctcAAA.TAGCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGtt                      <  2:1983596/98‑1 (MQ=255)


                                                                                 ccGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGtt                      >  2:2993629/1‑101 (MQ=25)


                                                                                  cGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTg                     >  2:4054662/1‑101 (MQ=25)


                                                                                    cAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                   >  1:2223171/1‑101 (MQ=25)


                                                                                    cAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                   <  1:978520/101‑1 (MQ=255)


                                                                                    cAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                   >  2:1176575/1‑101 (MQ=25)


                                                                                    cAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                   <  1:1210474/101‑1 (MQ=255)


                                                                                     aaa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTGGCac                  >  2:4305217/1‑100 (MQ=25)


                                                                                      aa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc                 >  1:607924/1‑101 (MQ=255)


                                                                                      aa.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATc                 >  1:2012001/1‑101 (MQ=255)


                                                                                       a.tatCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg                <  2:4425720/101‑1 (MQ=255)


                                                                                          atCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg              >  2:186368/1‑101 (MQ=255)


                                                                                           tCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg             >  1:3538011/1‑101 (MQ=255)


                                                                                           tCCCGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACATCAGATCAGCCCGGCGTGTTGCATCgcgg             >  2:1574151/1‑101 (MQ=255)


                                                                                            gcgggggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggc            <  1:4188926/98‑1 (MQ=255)


                                                                                              cGGGGGGAGGCTTGCTGAAAGC.AAGACGGGGGGAAGAGC.....CCCC.CGCACAGGTCGCAAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggcgg          >  2:3477870/1‑100 (MQ=255)


                                                                                                gggggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa        <  1:2515490/101‑1 (MQ=255)


                                                                                                  gggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg      >  2:3054918/1‑101 (MQ=255)


                                                                                                  gggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg      >  2:2383846/1‑101 (MQ=255)


                                                                                                  gggAGGATTGCTGAAAGC.AAGACGGGGG.....GCAGAG.CCCCGCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg      <  2:1718445/101‑1 (MQ=255)


                                                                                                   ggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc     >  2:1603751/1‑101 (MQ=255)


                                                                                                   ggAGGCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc     >  2:3641000/1‑101 (MQ=255)


                                                                                                    gAGTCTTGCTGAAAGC.AAGACGGGGGGCAGAGC.....CCCC.CGCACAGGTCGCCAAAAGGACCGCCCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg    <  1:559268/101‑1 (MQ=255)


AACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGAT.ATTT.GCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG.....GC.....CCCC.CGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGCG  >  NC_014034/408374‑408569

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG