New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 3051434	44 (0.200)	2 (0.010)	2/192	35.5	0.02	coding (261/1971 nt)	acsA3	acetate‑‑CoA ligase
	?	NC_014034	3294171 =	213 (0.940)					coding (107/2640 nt)	topA	DNA topoisomerase I
Rejected: Position hash score below cutoff.

GGATCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGACC  >  NC_014034/3051334‑3051456                                                                                                     |                       ggATCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGc                        >  1:1051080/1‑101 (MQ=32)  gATCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCa                       >  2:372179/1‑101 (MQ=32)  gATCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCa                       >  2:3533540/1‑101 (MQ=33)  gATCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCa                       <  2:1594305/101‑1 (MQ=32)   aTCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCAt                      <  1:194735/101‑1 (MQ=32)   aTCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCAt                      <  1:3657067/101‑1 (MQ=32)   aTCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCAt                      <  1:350047/101‑1 (MQ=32)   aTCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCAt                      <  1:3477956/101‑1 (MQ=32)    tCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATc                     <  1:1437783/101‑1 (MQ=32)    tCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATc                     >  1:3448112/1‑101 (MQ=32)     cACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCg                    >  1:618129/1‑101 (MQ=33)     cACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCg                    >  1:3065901/1‑101 (MQ=33)      ccGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAAAGCGTCCGTGAACTGCATCGa                   <  1:1156044/100‑1 (MQ=17)      aCGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGa                   <  2:3490489/101‑1 (MQ=32)      aCGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGa                   >  1:1596297/1‑101 (MQ=32)       cGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGAc                  <  2:1364638/101‑1 (MQ=32)        gCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGAcc                 <  1:4297957/101‑1 (MQ=32)        gCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGGCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTTCATTGAcc                 >  2:4203766/1‑101 (MQ=255)        gCCCTATACCAAGGGCAAGAATACCGATTTCCCCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGAcc                 <  2:3316655/101‑1 (MQ=12)         cccTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCg                <  1:4405847/101‑1 (MQ=32)            tataCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCa             >  1:1098654/1‑101 (MQ=32)             ataCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCAt            >  1:1459510/1‑101 (MQ=32)              taCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATc           >  2:91135/1‑101 (MQ=32)              taCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATc           <  1:338462/101‑1 (MQ=32)               aCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCt          >  1:2288903/1‑101 (MQ=32)               aCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCt          <  2:1453133/101‑1 (MQ=32)               aCCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCt          <  2:3065680/101‑1 (MQ=32)                ccAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTg         <  2:3696677/101‑1 (MQ=32)                ccAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTg         >  2:3395319/1‑101 (MQ=32)                ccAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTg         >  2:273016/1‑101 (MQ=32)                ccAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTg         <  2:2459913/101‑1 (MQ=32)                ccAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTg         <  2:227667/101‑1 (MQ=32)                ccAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTg         <  2:1893828/101‑1 (MQ=32)                 tctggTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgc        <  1:3275950/98‑1 (MQ=17)                 cAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgc        <  2:309500/101‑1 (MQ=32)                 cAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgc        >  1:3949166/1‑101 (MQ=32)                  aaGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgcg       >  1:4420274/1‑101 (MQ=32)                  aaGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgcg       <  2:2494769/101‑1 (MQ=32)                  aaGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGGGAACTGCATCGACCGGCATCTgcg       >  1:3655352/1‑101 (MQ=17)                   aGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgcgc      >  2:2443566/1‑101 (MQ=32)                   aGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgcgc      >  2:1546598/1‑101 (MQ=32)                   aGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgcgc      <  1:1066329/101‑1 (MQ=32)                    ggTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTgcaga     >  2:3275718/1‑98 (MQ=17)                    ggTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGcgcg     <  2:472364/101‑1 (MQ=32)                    ggTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGcgcg     >  2:3745671/1‑101 (MQ=32)                    ggTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAAAGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCACCGACCGGCATCTGcccg     >  1:1054098/1‑101 (MQ=255)                     gTCAAGAATACCGATTTCGCCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGa    <  2:1036765/101‑1 (MQ=17)                      tCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAc   >  1:2518822/1‑101 (MQ=31)                      tCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAc   <  2:1545218/101‑1 (MQ=31)                      tCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAc   <  2:2966436/101‑1 (MQ=31)                      tCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAc   <  2:2363512/101‑1 (MQ=31)                       cAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAcc  <  1:2473250/101‑1 (MQ=11)                       cAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAcc  >  1:487962/1‑101 (MQ=11)                       cAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAcc  <  1:3926176/101‑1 (MQ=11)                       cAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAcc  >  2:585861/1‑101 (MQ=11)                       cAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGAcc  <  2:1868497/101‑1 (MQ=11)                                                                                                     |                       GGATCACGCCCTATACCAAGGTCAAGAATACCGATTTCACCTTCGGCAAGGTCTCGATCAAATGGTTCGAGGATGGGGTGCTGAACGCGTCCGTGAACTGCATCGACCGGCATCTGCGCGACC  >  NC_014034/3051334‑3051456 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG