New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1253895 =53 (0.240)7 (0.030) 2/198 36.0 0.10 intergenic (+53/+38) RCAP_rcc01181/hisH hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
?NC_014034 = 2577295 77 (0.340)intergenic (+217/‑212) fdx/purU ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.C.GGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTG  >  NC_014034/2577196‑2577395
                                                                                                         |                                                                                                      
ccAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGccc                                                                                                        >  2:3336650/1‑101 (MQ=255)
 cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGcccc                                                                                                       <  2:129150/101‑1 (MQ=255)
 cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGcccc                                                                                                       <  1:3430696/101‑1 (MQ=255)
 cAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGcccc                                                                                                       <  2:3896411/101‑1 (MQ=255)
   ggAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCc..g                                                                                                   <  2:1295204/101‑1 (MQ=255)
   ggAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCc..g                                                                                                   <  1:122252/101‑1 (MQ=255)
     aaaaGCCAAAGCCGCCCCCGGCAGGACCGAAGG.CCCCGGGCCCCCGGGCCCC.TTTTATCTTGCCCAAAATACCCC.GGGGGT.C.CGGGGGCGGAGCCCCc..ggc                                                                                                 <  2:3989661/101‑1 (MQ=25)
      aaagccaaagccGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCc..ggcg                                                                                                <  1:3336887/101‑1 (MQ=255)
           caaagccGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCg                                                                                           >  2:3055833/1‑101 (MQ=255)
             agcccGCCCCCGGCAGG.GCGAAGGCCCCCAGCCCCCCGGCCCCT.TTTTATCTGCCCAAAAATACCCG.GGGGGC.CGG.GGGGCGGCCCCCCC..GGCGGGTCGcc                                                                                         <  2:3010393/98‑1 (MQ=2)
                 cGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCgggg                                                                                     >  1:4304899/1‑101 (MQ=255)
                 cGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCgggg                                                                                     >  1:2729857/1‑101 (MQ=255)
                  gTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGc                                                                                    >  1:2058156/1‑101 (MQ=255)
                  gTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCGGGGc                                                                                    >  1:3557623/1‑101 (MQ=255)
                    ccccGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGa                                                                                  >  2:447409/1‑101 (MQ=255)
                       cgggcggcccGAGGC.CCTCAGGCCCCCGGCCCCC.TTTTATCTTGCCAAAAAGCCCCG.GGGGGG.CGG.GGGGCGGACCCCCC..GGCGGGTCGCCGGGGCGAAGc                                                                               <  1:1541954/93‑1 (MQ=16)
                       cGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCGGGGGGAAGc                                                                               >  1:490123/1‑101 (MQ=25)
                          cAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCcgc                                                                            >  2:2446149/1‑101 (MQ=255)
                          cAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCGGGGCGAAGCcgc                                                                            >  1:2910297/1‑101 (MQ=255)
                           aGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCcgcg                                                                           >  2:63298/1‑101 (MQ=255)
                            ggACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGCAGCcgccg                                                                          >  2:2016965/1‑99 (MQ=255)
                            ggACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCgcgg                                                                          >  2:1541021/1‑101 (MQ=255)
                                 gAAGG.CCTCAGGCCCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa                                                                     <  1:999735/101‑1 (MQ=255)
                                 gAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGaaa                                                                     >  1:198304/1‑101 (MQ=255)
                                  aaGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCGGGGGGAAGCCCGGGGGaaaa                                                                    >  2:81202/1‑100 (MQ=21)
                                     g.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATccc                                                                 >  1:2385019/1‑101 (MQ=255)
                                       ccTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccg                                                                <  2:2902608/101‑1 (MQ=255)
                                           aGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCCGCGAAATcccggccc                                                            >  2:2126113/1‑101 (MQ=255)
                                              aCCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccccgg                                                         >  2:3657705/1‑101 (MQ=255)
                                                cccGGGCCCCTTTTTACCTTGCCAAAAATATCCC.GGGGGC.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATcccggccccggc                                                        <  2:4304630/101‑1 (MQ=18)
                                                 ccGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGC.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCaa                                                      <  2:2910076/101‑1 (MQ=255)
                                                  cGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCCGCAAg                                                     >  2:3792255/1‑101 (MQ=255)
                                                   gggCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCCAgc                                                    >  2:3742298/1‑101 (MQ=255)
                                                   cggCCCC.TTTTATCCTTCCCAAAAGATCCC.GGGGGTGC.G.GGGGCGGGGCCCCC..GGGGGGTCCCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAgc                                                    <  2:607427/100‑1 (MQ=25)
                                                       ccc.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGACGGCGGGGAGAAGGCCCGGCGGAAAcccggccccggggagacccc                                                >  1:952614/1‑92 (MQ=17)
                                                        cc.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg                                               >  1:4302177/1‑101 (MQ=255)
                                                        cc.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTg                                               >  1:187956/1‑101 (MQ=255)
                                                         c.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGGAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCttg                                              >  1:3665279/1‑99 (MQ=255)
                                                         c.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTgg                                              >  2:2175461/1‑101 (MQ=255)
                                                           ttttAT.TTCCCCAAAAAACCCG.GGGGGC.G.C.GGGGGGGGGCCCCCCGGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTggg                                             <  1:1017098/101‑1 (MQ=16)
                                                            tttATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGGGCCTGGGc                                            >  2:875872/1‑101 (MQ=255)
                                                            tttATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGc                                            >  1:678563/1‑101 (MQ=255)
                                                             ttATCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCg                                           >  2:3661253/1‑101 (MQ=255)
                                                                tCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGa                                        >  2:661937/1‑101 (MQ=255)
                                                                tCTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGa                                        <  1:2855786/101‑1 (MQ=255)
                                                                 cTTTCCCAAAAAACCCCGGGGGGG.C.G.GGGGGGGCGCCCCCCGGGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCggg                                         <  1:3786514/101‑1 (MQ=18)
                                                                 cTTGCCCAAAATGTCCT.GGGGGT.C.CGGGGGCGGGGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCTAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGaa                                       <  1:2833426/101‑1 (MQ=25)
                                                                 cTTGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGaa                                       >  1:2506365/1‑101 (MQ=255)
                                                                  ttGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGAAAGCGCCTGGGCGGGAAg                                      >  2:1977441/1‑101 (MQ=255)
                                                                  ttGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGGCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCCGGGCGGGGAg                                      >  1:3009802/1‑101 (MQ=21)
                                                                   tGCCCAAAATATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGa                                     <  2:1364871/101‑1 (MQ=255)
                                                                       cAAAATGTCCG.GGGGGT.CGG.GGGGCGGCGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgc                                 <  1:4106799/101‑1 (MQ=25)
                                                                         aaaTATCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATcgcgc                               >  1:1173934/1‑101 (MQ=255)
                                                                              tCCC.GGGGGT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGcccc                          >  2:1580515/1‑101 (MQ=255)
                                                                                   gggggT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGGCCCGGAg                      >  2:2160053/1‑101 (MQ=37)
                                                                                   gggggT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGATCGCGCGCCCCGGAg                      >  1:177871/1‑101 (MQ=255)
                                                                                   gggggT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGGAGATCGCGCGCCCCGGAg                      >  2:4230508/1‑101 (MQ=255)
                                                                                   gggggT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCgggg                      >  1:68574/1‑99 (MQ=255)
                                                                                     gggggccggggggGGGACCCCCG..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAg                      <  1:447449/92‑1 (MQ=38)
                                                                                      ggT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCaa                   >  2:562666/1‑101 (MQ=255)
                                                                                      ggT.C.CGGGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCaa                   >  1:3915274/1‑101 (MQ=255)
                                                                                         gtccgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAAt                  >  1:3033280/6‑101 (MQ=255)
                                                                                         gtccgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCCGCAAGCGCCTGGGCGGGAAGAACGCGCGCCCCGGAGCAAt                  >  1:473433/6‑101 (MQ=255)
                                                                                          tccgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAAtt                 >  1:3756856/5‑101 (MQ=255)
                                                                                          ccggggggGGGAGCCCCG..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAAtt                 <  2:2506202/97‑1 (MQ=255)
                                                                                           ccgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTg                >  1:2400491/4‑101 (MQ=255)
                                                                                            cgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTgg               >  2:3451212/3‑100 (MQ=255)
                                                                                            cgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGc               >  1:3246241/3‑101 (MQ=255)
                                                                                            cgggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGc               >  2:2694993/3‑101 (MQ=255)
                                                                                             gggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGGGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATAGCGCGCCCCGGAGCAATTGCg              >  2:872415/2‑101 (MQ=255)
                                                                                             gggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCg              >  2:1930487/2‑101 (MQ=255)
                                                                                             gggggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCCGGGCGGGAAGATCGCGCGCCCCGGCGCAATTGCg              >  1:4195025/2‑101 (MQ=255)
                                                                                               gggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGac            >  2:2456130/1‑101 (MQ=255)
                                                                                                ggCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGaca           <  2:4402287/101‑1 (MQ=255)
                                                                                                ggCGGACCCCCG..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGaca           <  2:395007/101‑1 (MQ=255)
                                                                                                   ggAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGc        >  2:877261/1‑101 (MQ=255)
                                                                                                    gAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGACATTGCGACACGcc       >  2:1251289/1‑101 (MQ=255)
                                                                                                     aGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCa      >  2:2242763/1‑101 (MQ=255)
                                                                                                        cccc..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCAcc  >  1:2018056/1‑100 (MQ=255)
                                                                                                        cccc..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCt   >  1:581952/1‑101 (MQ=255)
                                                                                                         ccc..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTg  <  2:473381/101‑1 (MQ=255)
                                                                                                         |                                                                                                      
CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGG.CCTCAGGACCCCGGGCCCC.TTTTATCTTGCCCAAAATATCCC.GGGGGT.C.C.GGGGCGGAGCCCCC..GGCGGGTCGCCGGGGCGAAGCCGCGGCGAAATCCCGGCCCCGGCAAGCGCCTGGGCGGGAAGATCGCGCGCCCCGGAGCAATTGCGACACGCCACCTG  >  NC_014034/2577196‑2577395

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG