New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1253895 =28 (0.130)42 (0.190) 10/194 28.1 0.34 intergenic (+53/+38) RCAP_rcc01181/hisH hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
?NC_014034 = 3439845 133 (0.590)intergenic (‑148/+15) RCAP_rcc03240/mutB ATPase AAA/methylmalonyl‑CoA mutase large subunit
Rejected: Position hash score below cutoff.

Only 100 of 148 total aligned reads displayed.

GGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAGAC  >  NC_014034/3439745‑3439943
                                                                                                       |                                                                                                  
  ccTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGGAAGATAAAAGGGGTTTGCTTTTATCTTTCCCCCAATATCCCGGGGGGGC..GGGGGGCGAGcccccc                                                                                                  >  2:3607859/1‑100 (MQ=25)
  ccTGCGGCCGATGCCTCCGGCGGGGATA.TTGGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCCcg                                                                                                  <  1:2061487/101‑1 (MQ=255)
   tgactttcGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATGAA.ACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGcccccc                                                                                                  <  2:550489/94‑2 (MQ=25)
   cTGCGGCCGATGCCTCCGGCGGGGGTATTTTGGGGCAGAAAAAAGGGGGTTTCTTTTTTTTTTTCCCCAAAATACCCGGGGGGGG..GGGGGGGGGGcccccc                                                                                                  >  1:78640/1‑100 (MQ=255)
   cTGCGGCCGATGCCTCCGGCGGGGATA.TTTTGGGCCAGAGAAAAGGGGTTTGCTTTTATCTTTTCCCCAATATCCCCGGGGTGG..GGGGGGAGCGccccccc                                                                                                 >  1:3005414/1‑99 (MQ=25)
     acttccGAGGCCTCCGGCGGGGATA.TTTGGGGCAAGAGGAA.CCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGccccccgc                                                                                                <  2:3713273/97‑4 (MQ=18)
       tttcGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATGAA.ACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGGGGGCAGCGccccccgcca                                                                                              <  2:2761523/98‑6 (MQ=25)
         ccGATGCCTCCGGCGGGGATA.TTTGGGGCAAGAAAAAGGGGCTTTGCTTTTATCTTTCCCCCAATATTCCCGGGGGGC..GGGGGCAGAGCCCCCGCcccccc                                                                                           >  2:2888596/1‑101 (MQ=21)
          cGATGCCTCCGGCGGGGGTA.TTTTGGGGAAGATAAAAGGGGTTTTGTTTTATCTTTTCCCCAATATCCCCGGGGGGC..GGGGGGGGAGGCACcgccgccccg                                                                                          >  2:3104460/1‑94 (MQ=255)
            aTGCCTCCGGCGGGGATA.TTTGGGGCAAGAAAAAGGGGCGTTGCTTTTATCTTTCCCCAAAAATCCCGGGGGGGC..GGGGGC..CGCGACCGCCCCGCCACGGt                                                                                      >  2:4101520/1‑101 (MQ=21)
             tGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATTTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGtt                                                                                     >  2:3518716/1‑101 (MQ=255)
               ccTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTTTCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCa                                                                                   >  1:2161175/1‑101 (MQ=255)
                    gggggggtga.tTTTGGGAAAAAGAAAGGGTTTTTTTTTTTTTCTTTCCCCCAAAGTCTCGGGGGGGG..GGGGGGCCAGCCCCCCGCCCGCCACGGTTCAcgc                                                                                <  2:4178830/92‑1 (MQ=255)
                     gcggGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCAcgccgc                                                                             >  2:2619010/1‑101 (MQ=255)
                     gcggGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCAcgccgc                                                                             >  1:3390024/1‑101 (MQ=255)
                      cggGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg                                                                            >  2:3678823/1‑101 (MQ=255)
                       ggggATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGa                                                                           >  2:3547996/1‑101 (MQ=255)
                       ggggATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGa                                                                           >  2:1208139/1‑101 (MQ=255)
                        gggATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCAcagatcgga                                                                          >  1:2084371/1‑93 (MQ=18)
                          gATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCg                                                                        >  2:394213/1‑101 (MQ=255)
                          gATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCg                                                                        >  1:2153630/1‑101 (MQ=255)
                          gATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCg                                                                        >  2:3634930/1‑101 (MQ=255)
                           ata.tTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGt                                                                       >  1:2390995/1‑101 (MQ=255)
                             a.tTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct                                                                     >  2:4033552/1‑101 (MQ=255)
                             a.tTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGtct                                                                     >  2:3296047/1‑101 (MQ=255)
                                ttGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTcc                                                                   >  2:2092987/1‑101 (MQ=255)
                                 tGGGGGAAAAGAAAAGGGTTTTTTTTTTTTCCTCCCCCAAAACTCGCGGGGGGGG..GGGGGGCCCCCCCCCCCCCCGCCACGGTTCACGCCGCGACCGtctc                                                                    <  2:3682491/101‑1 (MQ=255)
                                  ggggCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCgg                                                                 >  2:2077887/1‑101 (MQ=255)
                                  ggggCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCgg                                                                 >  2:3276674/1‑101 (MQ=255)
                                      cAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCggggcc                                                             >  2:2334541/1‑99 (MQ=255)
                                      cAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTc                                                             >  2:2735521/1‑101 (MQ=255)
                                       aaGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg                                                            >  1:1422501/1‑101 (MQ=255)
                                       aaGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg                                                            >  1:2268848/1‑101 (MQ=255)
                                       aaGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCg                                                            >  2:920840/1‑101 (MQ=255)
                                        aGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGc                                                           >  2:725819/1‑101 (MQ=255)
                                         gATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc                                                          >  2:184013/1‑101 (MQ=255)
                                         gATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc                                                          >  1:597182/1‑101 (MQ=255)
                                         gATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGcc                                                          >  1:3698547/1‑101 (MQ=255)
                                          aTAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCa                                                         >  1:179853/1‑101 (MQ=255)
                                           tAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAg                                                        >  1:2936988/1‑101 (MQ=255)
                                            aaaGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc                                                       >  2:4396419/1‑101 (MQ=255)
                                            aaaGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgc                                                       >  2:1055184/1‑101 (MQ=255)
                                              aGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc                                                     >  1:534456/1‑101 (MQ=255)
                                              aGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc                                                     >  2:355920/1‑101 (MQ=255)
                                              aGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgatc                                                     >  1:691976/1‑98 (MQ=255)
                                              aGGGGATTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAgcgc                                                     >  2:3780087/1‑101 (MQ=255)
                                                  gctttgctttTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcgacg                                                 >  2:4395451/1‑101 (MQ=255)
                                                   ctttgctttTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGcgacga                                                >  1:3312227/1‑101 (MQ=255)
                                                    tttgctttTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGat                                               >  1:2416613/1‑101 (MQ=255)
                                                      tgctttTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGatat                                             >  1:3178507/1‑101 (MQ=255)
                                                        ctttTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATcc                                           >  2:1560910/1‑101 (MQ=255)
                                                           ttATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatc                                        >  1:1429940/1‑101 (MQ=255)
                                                           ttATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatc                                        >  2:4155668/1‑101 (MQ=255)
                                                           ttATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatc                                        >  2:2621405/1‑101 (MQ=255)
                                                            tATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCcatca                                       >  2:2050720/1‑101 (MQ=255)
                                                              tCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATg                                     >  2:1430709/1‑101 (MQ=255)
                                                                 ttCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATc                                  >  1:3780540/1‑101 (MQ=255)
                                                                  tCCCCAAATATTCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATcc                                 >  2:2956736/1‑101 (MQ=255)
                                                                  tCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATcc                                 >  1:392802/1‑101 (MQ=255)
                                                                   ccccAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCg                                >  2:713766/1‑101 (MQ=255)
                                                                   ccccAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCg                                >  1:2600594/1‑101 (MQ=255)
                                                                      cAAATATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGtt                             >  2:3422688/1‑101 (MQ=255)
                                                                       aaaTATCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTc                            >  1:3230998/1‑101 (MQ=255)
                                                                         atatCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAg                          >  2:450366/1‑101 (MQ=255)
                                                                          tatCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGc                         >  2:2292917/1‑101 (MQ=255)
                                                                          tatCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGc                         >  2:849512/1‑101 (MQ=255)
                                                                          tatCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACCATATCCATCATGCTCCGGTTCAGc                         >  2:2081816/1‑101 (MQ=38)
                                                                           atCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGCCGCCAGCNCGACGATCTCCATCATGATCCGGTTCAGCt                        >  1:1335749/1‑101 (MQ=38)
                                                                            tCCCGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTc                       >  2:3231076/1‑101 (MQ=255)
                                                                             cccGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCTCGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCg                      >  2:932505/1‑101 (MQ=255)
                                                                             cccGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCg                      >  1:1585179/1‑101 (MQ=255)
                                                                               cGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaa                    >  2:3509106/1‑101 (MQ=255)
                                                                               cGGGGGTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaa                    >  2:1051005/1‑101 (MQ=255)
                                                                                gggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa                   >  2:1864904/1‑101 (MQ=255)
                                                                                gggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa                   >  1:1085802/1‑101 (MQ=255)
                                                                                gggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa                   >  2:1322649/1‑101 (MQ=255)
                                                                                gggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGaaa                   >  1:4065327/1‑101 (MQ=255)
                                                                                 ggggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAAt                  >  1:276433/1‑101 (MQ=255)
                                                                                   ggTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATcc                >  2:2031812/1‑101 (MQ=255)
                                                                                    gTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCt               >  1:2645851/1‑101 (MQ=255)
                                                                                    gTGC..GGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCt               >  1:3310052/1‑101 (MQ=255)
                                                                                          gggggCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCgg           >  1:1159395/1‑101 (MQ=255)
                                                                                           gggggcccgCCCCCCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCg            <  1:3241254/93‑1 (MQ=255)
                                                                                            ggcgcgcccccccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCgg           <  1:1759251/93‑1 (MQ=255)
                                                                                            ggcccccccccccCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCgg           <  2:948072/93‑1 (MQ=255)
                                                                                             ggCAGAGCCCC..CGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGGTCGAAATCCTTCGGCGt        >  2:4009044/1‑101 (MQ=255)
                                                                                               ccccccccccCCCCCGCCACGGTTCACGCCGCGGCCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGt        <  1:3867491/96‑1 (MQ=255)
                                                                                                 ccccccccCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtat      <  1:2619181/98‑1 (MQ=255)
                                                                                                 cagagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtat      >  1:3601810/6‑101 (MQ=255)
                                                                                                 cagagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtat      >  2:1559714/6‑101 (MQ=255)
                                                                                                  cccccccCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtata     <  1:1339642/99‑1 (MQ=255)
                                                                                                  agagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtata     >  1:1180297/5‑101 (MQ=255)
                                                                                                  agagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtata     >  1:3646035/5‑101 (MQ=255)
                                                                                                  agagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtata     >  1:4033607/5‑101 (MQ=255)
                                                                                                  agagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGtata     >  2:2362663/5‑101 (MQ=255)
                                                                                                   gagcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAg    >  1:2304059/4‑101 (MQ=255)
                                                                                                   ccccccGCCCCGCCACGGTTCCCGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAg    <  2:1163531/100‑1 (MQ=255)
                                                                                                   ccccccCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAg    <  1:1645290/100‑1 (MQ=255)
                                                                                                    cccccCCCCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAGa   <  1:3369850/101‑1 (MQ=255)
                                                                                                     gcccCCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAGAc  >  2:13446/2‑101 (MQ=255)
                                                                                                       |                                                                                                  
GGCCTGCGGCCGATGCCTCCGGCGGGGATA.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATATCCCGGGGGTGC..GGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCGACCGTCTCCGGGGTCGCCAGCGCGACGATATCCATCATGATCCGGTTCAGCTCGAAATCCTTCGGCGTATAGAC  >  NC_014034/3439745‑3439943

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG