BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1397632 =	137 (0.900)	52 (0.340)	5/134	25.6	0.28	coding (1514/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1434909	127 (0.560)	52 (0.340)	5/134	25.6	0.28	intergenic (‑688/‑270)	RCAP_rcc01334/RCAP_rcc01335	hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 210 total aligned reads displayed.


CCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAC  >  NC_014034/1434809‑1435009


ccTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                                                      >  2:87029/1‑101 (MQ=255)


ccTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                                                      <  2:3735859/101‑1 (MQ=255)


 cTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                                                     >  2:4380120/1‑101 (MQ=255)


    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGCAGATCTCGGTCTGGGTGCGCTCGCGGTTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcat                                                                                                    >  2:3153404/1‑99 (MQ=2)


    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  >  2:2849577/1‑101 (MQ=255)


    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  >  1:2256950/1‑101 (MQ=255)


    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  <  1:1836264/101‑1 (MQ=255)


    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                                                  >  1:4007299/1‑101 (MQ=255)


     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                                                                                 <  1:4278980/101‑1 (MQ=255)


     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                                                                                 >  1:4146570/1‑101 (MQ=255)


      cGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGAt                                                                                                >  2:1901763/1‑101 (MQ=255)


       gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATg                                                                                               <  2:3840555/101‑1 (MQ=255)


       gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATg                                                                                               >  2:1540789/1‑101 (MQ=255)


        cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                                                                                              >  2:697406/1‑101 (MQ=255)


        cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                                                                                              <  2:1828558/101‑1 (MQ=255)


          ccccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGt                                                                                            <  2:4271849/101‑1 (MQ=255)


            ccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGc                                                                                          >  1:2333872/1‑101 (MQ=255)


             cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                                                                                         >  1:1895544/1‑101 (MQ=255)


             cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                                                                                         >  1:3075924/1‑101 (MQ=255)


                 cgGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGAt                                                                                     >  1:1207779/1‑101 (MQ=255)


                  gggggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                                                    >  1:2190256/1‑101 (MQ=255)


                  gggggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                                                    >  1:3132158/1‑101 (MQ=255)


                  gggggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                                                    <  2:1462737/101‑1 (MQ=255)


                    gggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCa                                                                                  <  1:3698140/101‑1 (MQ=255)


                    gggCGCGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGAGGATCGAAACCGTGATGCGTGCCCGATCCa                                                                                  >  1:304450/1‑101 (MQ=255)


                      gCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                                                >  2:2076306/1‑101 (MQ=255)


                      gCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                                                <  1:2382639/101‑1 (MQ=255)


                      gCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                                                <  1:909352/101‑1 (MQ=255)


                       cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTTGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGGCCGATCCACCg                                                                               >  2:487081/1‑101 (MQ=255)


                       cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg                                                                               <  1:589610/101‑1 (MQ=255)


                       cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg                                                                               >  2:3502307/1‑101 (MQ=255)


                         tGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg                                                                             >  2:3019225/1‑101 (MQ=255)


                         tGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg                                                                             >  1:669431/1‑101 (MQ=255)


                           gATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggggt                                                                           >  2:1097166/1‑99 (MQ=255)


                           gATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt                                                                           >  1:1245553/1‑101 (MQ=255)


                           gATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt                                                                           <  1:3377532/101‑1 (MQ=255)


                              cGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                                                        >  1:2011717/1‑101 (MQ=255)


                              cGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                                                        >  2:1818766/1‑101 (MQ=255)


                              cGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                                                        >  1:1456839/1‑101 (MQ=255)


                                aaaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCCTCGGGTTTcgcg                                                                      >  1:4320885/1‑101 (MQ=255)


                                aaaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg                                                                      >  2:564461/1‑101 (MQ=255)


                                 aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg                                                                     >  2:3302296/1‑101 (MQ=255)


                                 aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg                                                                     >  1:2927894/1‑101 (MQ=255)


                                 aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg                                                                     <  1:3222077/101‑1 (MQ=255)


                                 aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCCCgg                                                                     >  2:453780/1‑101 (MQ=255)


                                   cATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGcc                                                                   >  1:2677861/1‑101 (MQ=255)


                                   cATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGcc                                                                   <  1:150729/101‑1 (MQ=255)


                                    aTGGAAACCCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCg                                                                  <  2:1218631/101‑1 (MQ=255)


                                    aTGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCg                                                                  >  2:2231881/1‑101 (MQ=255)


                                    aTGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCg                                                                  <  2:2717318/101‑1 (MQ=255)


                                     tGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGa                                                                 >  1:932722/1‑101 (MQ=255)


                                     tGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGa                                                                 >  2:1791425/1‑101 (MQ=255)


                                     tGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCCCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCgc                                                                 >  2:1823965/1‑100 (MQ=255)


                                      ggAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGAt                                                                <  1:2308140/101‑1 (MQ=255)


                                       gAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATg                                                               <  2:3928681/101‑1 (MQ=255)


                                        aaaaCCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGc                                                              >  2:4013071/1‑101 (MQ=255)


                                               cgG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                                                       >  2:420122/1‑101 (MQ=255)


                                               cgG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                                                       >  1:3471801/1‑101 (MQ=255)


                                               cgG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                                                       <  1:3019446/101‑1 (MQ=255)


                                               cgG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                                                       >  2:3427614/1‑101 (MQ=255)


                                                gg.CT.TCACCGCGCGGGATTGGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCg                                                      <  1:3216458/101‑1 (MQ=255)


                                                 ggat.tCACCGCGCGGGATTGGGTAGCTCCCCCCGCGGGGGCGTGGATCGAAACCGAGATGCGTGCCCGATCAACCGGGGTTCGCGGCCGATGCGGCTccca                                                      >  2:729012/4‑100 (MQ=37)


                                                 g.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGCAACCGGGATGCGGGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTcccca                                                     >  1:675628/1‑99 (MQ=255)


                                                      tCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAgg                                                  >  1:1685156/1‑100 (MQ=255)


                                                      tCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAgg                                                  >  1:354867/1‑100 (MQ=255)


                                                      tCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATAGAAACCGTGATGCGTGCCCGATCCATCGGGCTTCGCGGCCGATGCGGCTCCCGAAgg                                                  >  2:900709/1‑100 (MQ=255)


                                                       cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAGCCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAggg                                                 >  2:2011418/1‑99 (MQ=255)


                                                       cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTg                                                 >  1:4394772/1‑101 (MQ=255)


                                                         ccGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGAt                                               <  1:5381/101‑1 (MQ=255)


                                                           gcgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCa                                             <  2:2940291/101‑1 (MQ=255)


                                                            cgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCaa                                            <  2:950940/101‑1 (MQ=255)


                                                              cgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGGGATCAAgg                                          >  2:782243/1‑101 (MQ=255)


                                                                   ttGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTggg                                     >  2:3190828/1‑100 (MQ=255)


                                                                    tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTg                                    >  1:2849383/1‑101 (MQ=255)


                                                                      ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcg                                  <  2:312354/101‑1 (MQ=255)


                                                                        tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcgcg                                >  1:2123458/1‑101 (MQ=255)


                                                                        tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcgcg                                <  1:4413570/101‑1 (MQ=255)


                                                                        tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcgcg                                <  2:2891796/101‑1 (MQ=255)


                                                                          gCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCa                              >  1:3613957/1‑101 (MQ=255)


                                                                             ccccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAAt                           <  2:2515636/101‑1 (MQ=255)


                                                                             ccccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAAt                           <  1:1611558/101‑1 (MQ=255)


                                                                               ccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATcc                         <  1:3269576/101‑1 (MQ=255)


                                                                               ccccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATcc                         <  2:2333722/101‑1 (MQ=255)


                                                                                cccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCa                        >  2:2738290/1‑101 (MQ=255)


                                                                                cccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCa                        >  1:2715647/1‑101 (MQ=255)


                                                                                 ccGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCAt                       >  1:448980/1‑101 (MQ=255)


                                                                                   gcgGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCg                     <  1:4293882/101‑1 (MQ=255)


                                                                                   gcgGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCg                     <  2:2454076/101‑1 (MQ=255)


                                                                                       gggCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGcc                 >  2:571766/1‑101 (MQ=255)


                                                                                        ggCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGCAGGGATCAAGGCTGGGGCGCGCAAATCCATCGAGCCa                >  1:1428423/1‑101 (MQ=255)


                                                                                        ggCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCa                <  2:1245460/101‑1 (MQ=255)


                                                                                            tGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCg            >  1:3244060/1‑101 (MQ=255)


                                                                                             ggATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGGGCGCGCAAATCCATCGAGCCAATCgg           >  2:1884974/1‑101 (MQ=255)


                                                                                             ggATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGGGCGCGCAAATCCATCGAGCCAATCgg           >  2:35566/1‑101 (MQ=255)


                                                                                              gATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGGGCGCGCAAATCCATCGAGCCAATCggg          >  1:806941/1‑101 (MQ=255)


                                                                                               aTCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGgc         <  2:3389894/101‑1 (MQ=255)


                                                                                                tCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGgcg        <  1:3502548/101‑1 (MQ=255)


                                                                                                 cGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGgcgc       >  1:2471614/1‑101 (MQ=255)


                                                                                                    aaCCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCa    >  2:387220/1‑101 (MQ=255)


                                                                                                      ccGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAc  >  2:239455/1‑101 (MQ=255)


CCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCGCGCAAATCCATCGAGCCAATCGGGCGCCCAAC  >  NC_014034/1434809‑1435009

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG