BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1397797	95 (0.650)	94 (0.640)	40/130	6.8	0.44	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
*	?	NC_014034	1434877 =	145 (0.640)	94 (0.640)	40/130	6.8	0.44	intergenic (‑656/‑302)	RCAP_rcc01334/RCAP_rcc01335	hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 199 total aligned reads displayed.


CGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCG  >  NC_014034/1434777‑1434977


  acgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGt                                                                                                    <  2:422299/101‑1 (MQ=255)


   cgcgCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTc                                                                                                   <  1:70918/101‑1 (MQ=255)


    gcgcTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCg                                                                                                  <  1:1275876/101‑1 (MQ=255)


    gcgcTGAAGGAGGGTGATCTCGGTGGCGCCTTGACGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCg                                                                                                  <  1:3794876/101‑1 (MQ=255)


        tGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTcc                                                                                              >  1:3325169/1‑101 (MQ=255)


          aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTcccc                                                                                            >  2:589542/1‑101 (MQ=255)


          aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTcccc                                                                                            >  2:2770456/1‑101 (MQ=255)


           aggaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTccccc                                                                                           <  1:2595298/101‑1 (MQ=255)


               gggTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCcgcg                                                                                       >  2:3651346/1‑101 (MQ=255)


               gggTGATCTCGGTGGCGCCTTGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCcgcg                                                                                       <  1:1933743/101‑1 (MQ=255)


                 gTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCggg                                                                                     <  1:2977475/101‑1 (MQ=255)


                  tGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCgggg                                                                                    >  2:1159454/1‑101 (MQ=255)


                      ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGGCGCTCCCCCCGCGGGGGCgg                                                                                >  2:1611452/1‑100 (MQ=255)


                        cGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTgg                                                                              <  1:4313459/101‑1 (MQ=255)


                         ggTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             >  1:3982303/1‑101 (MQ=255)


                          gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            >  2:2893245/1‑101 (MQ=255)


                          gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            >  2:1446944/1‑101 (MQ=255)


                           tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGGTCCCCCCGCGGGGGCGTGGGTc                                                                           >  1:2161977/1‑101 (MQ=255)


                           tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  1:4022353/1‑101 (MQ=255)


                           tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  1:1569869/1‑101 (MQ=255)


                             gcgcCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                         >  1:1065695/1‑101 (MQ=255)


                                ccTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      <  2:3735859/101‑1 (MQ=255)


                                 cTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                     >  2:4380120/1‑101 (MQ=255)


                                    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                  <  1:1836264/101‑1 (MQ=255)


                                    gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                                                  >  2:2732636/1‑101 (MQ=255)


                                     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                                                 <  1:4278980/101‑1 (MQ=255)


                                     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                                                 >  1:4146570/1‑101 (MQ=255)


                                      cGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGAt                                                                >  2:1901763/1‑101 (MQ=255)


                                       gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATg                                                               <  2:3840555/101‑1 (MQ=255)


                                        cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                                                              <  2:1828558/101‑1 (MQ=255)


                                          ccccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGt                                                            >  2:4082587/1‑101 (MQ=255)


                                          ccccccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGt                                                            <  2:4271849/101‑1 (MQ=255)


                                             cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                                                         >  1:1895544/1‑101 (MQ=255)


                                             cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                                                         >  2:3031834/1‑101 (MQ=255)


                                             cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                                                         >  1:3075924/1‑101 (MQ=255)


                                                 cgGGGGCGTGGATCGAACCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGAt                                                     <  1:672999/101‑1 (MQ=255)


                                                 cgGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGAt                                                     >  1:1207779/1‑101 (MQ=255)


                                                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                    >  1:2679628/1‑101 (MQ=255)


                                                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                    <  2:1462737/101‑1 (MQ=255)


                                                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                    >  1:3132158/1‑101 (MQ=255)


                                                  gggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                                                    <  1:3609333/101‑1 (MQ=255)


                                                   ggggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATcc                                                   >  2:507411/1‑101 (MQ=255)


                                                    gggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCa                                                  <  2:2161838/101‑1 (MQ=255)


                                                    gggCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCa                                                  <  1:3698140/101‑1 (MQ=255)


                                                    gggCGCGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGAGGATCGAAACCGTGATGCGTGCCCGATCCa                                                  >  1:304450/1‑101 (MQ=255)


                                                      gCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                <  2:189087/101‑1 (MQ=255)


                                                      gCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                                                <  1:909352/101‑1 (MQ=255)


                                                       cGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGCTGCGTGCCCGATCCCTCg                                               >  2:72479/1‑101 (MQ=255)


                                                       cGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg                                               >  2:3502307/1‑101 (MQ=255)


                                                         tGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg                                             >  2:467007/1‑101 (MQ=255)


                                                          ggATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGt                                            >  2:2943609/1‑101 (MQ=255)


                                                           gATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggggt                                           >  2:1097166/1‑99 (MQ=255)


                                                           gATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt                                           >  2:970426/1‑101 (MQ=255)


                                                           gATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt                                           >  1:1245553/1‑101 (MQ=255)


                                                           gATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt                                           <  1:3377532/101‑1 (MQ=255)


                                                              cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                        >  2:1818766/1‑101 (MQ=255)


                                                              cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                        >  1:1456839/1‑101 (MQ=255)


                                                              cGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg                                        >  1:2040839/1‑101 (MQ=255)


                                                                aaaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCCTCGGGTTTcgcg                                      >  1:4320885/1‑101 (MQ=255)


                                                                aaaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg                                      <  1:2281464/101‑1 (MQ=255)


                                                                aaaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg                                      >  2:564461/1‑101 (MQ=255)


                                                                 aaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg                                     >  1:2927894/1‑101 (MQ=255)


                                                                 aaCATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg                                     <  1:3222077/101‑1 (MQ=255)


                                                                   cATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGcc                                   <  1:150729/101‑1 (MQ=255)


                                                                    aTGGAAACCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCg                                  <  2:1218631/101‑1 (MQ=255)


                                                                     tGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGa                                 >  2:451964/1‑101 (MQ=255)


                                                                     tGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGa                                 >  1:3528752/1‑101 (MQ=255)


                                                                     tGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGa                                 >  1:932722/1‑101 (MQ=255)


                                                                     tGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCCCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCgc                                 >  2:1823965/1‑100 (MQ=255)


                                                                      ggAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGAt                                <  1:2308140/101‑1 (MQ=255)


                                                                       gAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATg                               <  2:3928681/101‑1 (MQ=255)


                                                                        aaaaCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGc                              >  2:4013071/1‑101 (MQ=255)


                                                                           aCCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGc                           >  1:3879618/1‑101 (MQ=255)


                                                                             cgcgGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTc                         >  1:59344/1‑101 (MQ=255)


                                                                               ctgCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                       <  2:2852938/99‑1 (MQ=255)


                                                                               cgGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                       >  2:3427614/1‑101 (MQ=255)


                                                                               cgGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTccc                       >  1:3471801/1‑101 (MQ=255)


                                                                                ggattCACCGCGCGGGATTGGGTAGCTCCCCCCGCGGGGGCGTGGATCGAAACCGAGATGCGTGCCCGATCAACCGGGGTTCGCGGCCGATGCGGCTccca                      >  2:729012/4‑100 (MQ=37)


                                                                                ggCTTCCCCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCg                      <  1:1601035/101‑1 (MQ=255)


                                                                                ggCTTCACCGCGCGGGATTGGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCg                      <  1:3216458/101‑1 (MQ=255)


                                                                                  cTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGaa                    >  2:3197368/1‑101 (MQ=255)


                                                                                    tCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAgg                  >  1:1685156/1‑100 (MQ=255)


                                                                                     cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAGCCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAggg                 >  2:2011418/1‑99 (MQ=255)


                                                                                     cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTg                 >  1:4394772/1‑101 (MQ=255)


                                                                                     cACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTg                 >  2:762000/1‑101 (MQ=255)


                                                                                      aCCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGa                <  2:3131934/101‑1 (MQ=255)


                                                                                       ccGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGAt               <  1:5381/101‑1 (MQ=255)


                                                                                       ccGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGAt               <  2:2677689/101‑1 (MQ=255)


                                                                                         gcgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCa             >  1:2641600/1‑101 (MQ=255)


                                                                                         gcgcgGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCa             <  2:2455587/101‑1 (MQ=255)


                                                                                              ggATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCt        >  1:223705/1‑101 (MQ=255)


                                                                                               gATTGGGTCGCTCCCCCCGCGGGGGCGTGGCTCGAAAACGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGACGTGATCAAGGCTg       >  2:3166170/1‑101 (MQ=255)


                                                                                               gATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTg       <  2:932637/101‑1 (MQ=255)


                                                                                               gATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTg       <  2:1537690/101‑1 (MQ=255)


                                                                                               gATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTg       <  2:2256805/101‑1 (MQ=255)


                                                                                                 ttGGGTCGCTCGCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCCggg     >  2:894409/1‑100 (MQ=255)


                                                                                                  tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTg    <  1:2359906/101‑1 (MQ=255)


                                                                                                  tGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTg    >  1:2849383/1‑101 (MQ=255)


                                                                                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcg  >  2:822007/1‑101 (MQ=255)


                                                                                                    ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTgcg  <  2:3324937/101‑1 (MQ=255)


CGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGGCTTCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCGATGCGGCTCCCGAAGTGATCAAGGCTGGTGCG  >  NC_014034/1434777‑1434977

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG