New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 216938 =242 (1.140)2 (0.010) 2/188 35.1 0.01 coding (1606/2253 nt) RCAP_rcc00183 ABC transporter ATP‑binding/permease
?NC_014034 3015352 = 222 (0.980)coding (741/1395 nt) fumC fumarate hydratase
Rejected: Position hash score below cutoff.

Only 100 of 236 total aligned reads displayed.

GCGCGCCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAGCTTCA  >  NC_014034/3015252‑3015449
                                                                                                    |                                                                                                 
gcgcgcCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGcgcg                                                                                                   <  1:1892720/101‑1 (MQ=255)
 cgcgcCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCgcgg                                                                                                  <  1:3384133/101‑1 (MQ=255)
 cgcgcCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCgcgg                                                                                                  >  1:309767/1‑101 (MQ=255)
  gcgcCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCgcggc                                                                                                 <  1:2088417/101‑1 (MQ=255)
   cgcCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCgcggcg                                                                                                >  2:4145643/1‑101 (MQ=255)
     cccGAGAAGAACACCGCCGCATCATGCGCGGCGAGCGTCTGGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGAt                                                                                              <  2:1057284/101‑1 (MQ=255)
     cccGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGAt                                                                                              <  1:2344672/101‑1 (MQ=255)
     cccGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGAt                                                                                              >  1:3919911/1‑101 (MQ=255)
      ccGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATg                                                                                             >  1:2012497/1‑101 (MQ=255)
       cGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGc                                                                                            <  1:2611202/101‑1 (MQ=255)
       cGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGc                                                                                            >  1:4141476/1‑101 (MQ=255)
        gagaAGAACACCATCGCATCATGCGCGGCTAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGTAGGCCGGCGATCTCGGCTATCTGCGCCGCGCTGCg                                                                                           >  2:2657027/1‑101 (MQ=255)
        gagaAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCg                                                                                           >  2:3865210/1‑101 (MQ=255)
           aagaaCACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGCGATCTCGGCTATCTGCGCGGCGATGCGGGt                                                                                        >  1:547464/1‑101 (MQ=255)
             gaaCACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTac                                                                                      >  2:1274338/1‑100 (MQ=255)
             gaaCACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTAt                                                                                      <  1:154138/101‑1 (MQ=255)
             gaaCACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTAt                                                                                      <  1:2653730/101‑1 (MQ=255)
             gaaCACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTAt                                                                                      <  2:461090/101‑1 (MQ=255)
               acacCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATcc                                                                                    >  1:1061067/1‑101 (MQ=255)
                cacCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATccc                                                                                   <  1:986857/101‑1 (MQ=255)
                cacCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATccc                                                                                   <  1:2745972/101‑1 (MQ=255)
                 acCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCa                                                                                  <  1:220936/101‑1 (MQ=255)
                 acCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCa                                                                                  <  2:145233/101‑1 (MQ=255)
                   cATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAAc                                                                                >  2:1997743/1‑101 (MQ=255)
                     gcGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCg                                                                              <  1:3201008/100‑1 (MQ=255)
                      cGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGa                                                                             >  2:3336759/1‑101 (MQ=255)
                       gCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGAc                                                                            <  2:2698799/101‑1 (MQ=255)
                       gCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGAc                                                                            <  1:1827202/101‑1 (MQ=255)
                       gCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGAc                                                                            <  1:1119878/101‑1 (MQ=255)
                       gCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGAc                                                                            <  2:3636996/101‑1 (MQ=255)
                          tcatGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGAcgcg                                                                         <  2:2847728/101‑1 (MQ=255)
                           catGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCgg                                                                        >  2:1862800/1‑101 (MQ=255)
                            atGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCggg                                                                       >  2:2298764/1‑101 (MQ=255)
                             tGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGgt                                                                      >  1:3662320/1‑101 (MQ=255)
                               cgcgGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGgtgt                                                                    <  2:309732/101‑1 (MQ=255)
                                gcggcgAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGCATCCCAACCGACGCGGGTGtt                                                                   >  2:515724/1‑101 (MQ=255)
                                  ggcgAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCa                                                                 <  1:1972967/101‑1 (MQ=255)
                                   gcgAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAg                                                                <  2:1350429/101‑1 (MQ=255)
                                    cgAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGc                                                               >  1:2953717/1‑101 (MQ=255)
                                     gAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGcc                                                              <  1:3336996/101‑1 (MQ=255)
                                        cgcCTCGAACTTGTTCGGCGCGGGGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGCATCCCAACCGACGCGGGTGTTCAGCCCgg                                                           >  2:728812/1‑101 (MQ=255)
                                         gcCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGt                                                          <  1:424755/101‑1 (MQ=255)
                                         gcCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGt                                                          <  1:3079901/101‑1 (MQ=255)
                                         gcCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGt                                                          >  2:3149838/1‑101 (MQ=255)
                                         gcCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGt                                                          >  1:808486/1‑101 (MQ=255)
                                          ccTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTg                                                         <  2:2479191/101‑1 (MQ=255)
                                          catCGGACTTGGTCGGGGCGGTGACAAAGGACAGGCCGTTGATCTAGGCTATCTGCGCGGAGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTg                                                         <  2:3573017/99‑1 (MQ=255)
                                              gAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGa                                                     >  2:3732928/1‑101 (MQ=255)
                                               aaCTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGAc                                                    <  1:4090508/101‑1 (MQ=255)
                                                 cTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGGCGCGGGTGTTCAGCCCGGTGCCGACAg                                                  >  1:2032630/1‑101 (MQ=255)
                                                  ttGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGc                                                 >  1:3236033/1‑101 (MQ=255)
                                                   tGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCg                                                <  1:3475121/101‑1 (MQ=255)
                                                     ttCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGt                                              >  1:4406926/1‑101 (MQ=255)
                                                     ttCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGt                                              <  2:1648000/101‑1 (MQ=255)
                                                      tCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTg                                             >  1:2394154/1‑101 (MQ=255)
                                                       cGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGAATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGtcc                                            >  2:4428082/1‑99 (MQ=255)
                                                            cgGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGccc                                       <  2:1421715/101‑1 (MQ=255)
                                                            cgGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGAATCCCAACCGACGCGGGTGTTCAACCCGGTGCCGACAGCGGCGCCGccc                                       >  2:820342/1‑101 (MQ=255)
                                                             ggTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCt                                      >  1:2837726/1‑101 (MQ=255)
                                                             ggTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCt                                      <  2:3987655/101‑1 (MQ=255)
                                                              gTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTg                                     <  2:94077/101‑1 (MQ=255)
                                                               tGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTgc                                    <  1:148109/101‑1 (MQ=255)
                                                               tGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTgc                                    >  1:64322/1‑101 (MQ=255)
                                                                 aCAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTgcgc                                  >  2:4132271/1‑101 (MQ=255)
                                                                 aCAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTgcgc                                  <  2:1167072/101‑1 (MQ=255)
                                                                  cAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGcc                                 <  2:379762/101‑1 (MQ=255)
                                                                  cAAAGGGCAGGCCGGTGATCTCGGCTATCTGAGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCTGGAGCCGACAGCGGTGCCGCCCTGCGcc                                 >  2:1802747/1‑101 (MQ=255)
                                                                   aaaGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCa                                <  2:2012368/101‑1 (MQ=255)
                                                                   aaaGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCa                                >  1:724110/1‑101 (MQ=255)
                                                                     aggctaGGCCGGTGATCTCGGATATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGc                              >  2:3769254/6‑101 (MQ=255)
                                                                     aGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGc                              <  2:1492961/101‑1 (MQ=255)
                                                                       ggCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTc                            >  2:2029531/1‑101 (MQ=255)
                                                                         cAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCAt                          >  2:3410731/1‑101 (MQ=255)
                                                                          aGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATa                         >  2:2821066/1‑101 (MQ=255)
                                                                           ggCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAg                        <  1:2194922/101‑1 (MQ=255)
                                                                           ggCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAg                        <  1:1439263/101‑1 (MQ=255)
                                                                            gCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGa                       <  2:4174563/101‑1 (MQ=255)
                                                                               ggTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGatat                    <  1:1647938/101‑1 (MQ=255)
                                                                               ggTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGatat                    <  1:3188187/101‑1 (MQ=255)
                                                                               ggTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGatat                    >  2:2614292/1‑101 (MQ=255)
                                                                               ggTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGatat                    >  1:3522502/1‑101 (MQ=255)
                                                                               ggTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGatat                    <  2:3040581/101‑1 (MQ=255)
                                                                                  gATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCg                 <  1:1370953/101‑1 (MQ=255)
                                                                                  gATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCg                 >  2:2904578/1‑101 (MQ=255)
                                                                                     ctcGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCa              <  1:4342598/101‑1 (MQ=255)
                                                                                     ctcGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCa              <  1:1274431/101‑1 (MQ=255)
                                                                                     ctcGGCCATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCGGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCa              <  1:742740/101‑1 (MQ=255)
                                                                                       cGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAgc            >  2:559948/1‑101 (MQ=255)
                                                                                       cGGCTATCTGCGCGGCGATGCGGGGATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAgc            >  2:325489/1‑101 (MQ=255)
                                                                                        ggCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAgcg           <  1:1862924/101‑1 (MQ=255)
                                                                                          cTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGcc         <  1:4314656/101‑1 (MQ=255)
                                                                                          cTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGcc         >  2:390105/1‑101 (MQ=255)
                                                                                           tATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCa        >  2:2543981/1‑101 (MQ=255)
                                                                                           tATCGGCGCGGCGATGCGGGTATCCCACCCGACGGGGGTGTTCAGCCCGGTGCCGACAGGGGTGCCGCCCTGCGCCAGCTCATAGATAGGCGGCAGCGCCa        <  2:2984440/101‑1 (MQ=255)
                                                                                            aTCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAg       <  2:2142357/101‑1 (MQ=255)
                                                                                            aTCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAg       >  1:1138647/1‑101 (MQ=255)
                                                                                              cTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAGCt     >  2:3370889/1‑101 (MQ=255)
                                                                                                 cgcgGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAGCTTCa  <  2:4406654/101‑1 (MQ=255)
                                                                                                 cgcgGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAGCTTCa  <  2:2545647/101‑1 (MQ=255)
                                                                                                 cgcgGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAGCTTCa  <  1:3769507/101‑1 (MQ=255)
                                                                                                    |                                                                                                 
GCGCGCCCGAGAAGAACACCATCGCATCATGCGCGGCGAGCGCCTCGAACTTGTTCGGCGCGGTGACAAAGGGCAGGCCGGTGATCTCGGCTATCTGCGCGGCGATGCGGGTATCCCAACCGACGCGGGTGTTCAGCCCGGTGCCGACAGCGGTGCCGCCCTGCGCCAGCTCATAGATATGCGGCAGCGCCAGCTTCA  >  NC_014034/3015252‑3015449

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG