BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2330175	43 (0.190)	19 (0.080)	5/198	32.7	0.21	intergenic (+150/+162)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	2577165 =	104 (0.460)	19 (0.080)	5/198	32.7	0.21	intergenic (+87/‑342)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 107 total aligned reads displayed.


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGG..CCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258


aaaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg                                                                                                  >  2:2222278/1‑101 (MQ=255)


aaaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggg                                                                                                  >  2:2645650/1‑101 (MQ=255)


aaaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCCTAGCTTTGCCCAAGCGACCCGGC..ggg                                                                                                  >  1:3131659/1‑101 (MQ=255)


  aaGCCGATCTGACATTGCGATGAAACGGCCGTCTTCGGGCTGGCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTCGCTTCGCCATGGCGACCCGGC..cgggg                                                                                                <  2:2220147/101‑1 (MQ=255)


  aaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGG..gcggg                                                                                                >  1:335362/1‑101 (MQ=255)


   aGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..c                                                                                             <  2:1994124/101‑1 (MQ=255)


   aGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..c                                                                                             <  1:2143897/101‑1 (MQ=255)


    gCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ct                                                                                            <  1:541823/101‑2 (MQ=255)


     cAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..ggggcggg                                                                                             >  1:1447044/1‑97 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctcc                                                                                          <  1:1044141/101‑4 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctcc                                                                                          <  1:4411698/101‑4 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctcc                                                                                          <  1:134922/101‑4 (MQ=255)


       gATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctccg                                                                                         <  1:1542074/101‑5 (MQ=255)


        aTCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctccgc                                                                                        <  1:2863946/101‑6 (MQ=255)


        aTCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctccgc                                                                                        <  1:1598343/101‑6 (MQ=255)


           tGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGGCTTGGCTTCGCCAAGGCGACCCGGC..tggggggtgttttc                                                                                       >  2:3449551/1‑92 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctccgccccc                                                                                    <  2:2318234/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctccgccccc                                                                                    <  1:1457475/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGg..ctccgccccc                                                                                    <  2:2846727/101‑10 (MQ=255)


                 cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAcc                                                                                 <  2:815515/101‑1 (MQ=255)


                  gcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccc                                                                                <  2:2917079/101‑1 (MQ=255)


                   ctattaaaCGTCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAcccc                                                                               <  2:3634523/96‑1 (MQ=25)


                   cgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..CGGGG..GGGCCCCCCCCcccccc                                                                             >  2:213335/1‑100 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                              <  1:684887/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                              <  1:381011/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                              <  1:2562181/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                              <  2:3290869/101‑1 (MQ=255)


                    gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                              <  2:3374074/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                             <  2:884536/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                             <  1:973041/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                             <  2:3874169/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                             <  2:4214129/101‑1 (MQ=255)


                      tGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCgg                                                                            <  1:3677634/101‑1 (MQ=255)


                      ggAAGCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCgg                                                                            <  2:3388297/100‑1 (MQ=37)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGc                                                                           <  1:1750676/101‑1 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGc                                                                           <  2:2099717/101‑1 (MQ=255)


                       gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGc                                                                           <  1:3123403/101‑1 (MQ=255)


                        aaccGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCg                                                                          <  2:4155695/98‑1 (MQ=37)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGCCCCGGC..GGGGGCTCCGCCCCCGCCCCCCCGGCGt                                                                         <  2:3147694/101‑1 (MQ=37)


                           cGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAt                                                                       <  2:1255513/101‑1 (MQ=255)


                            ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAtt                                                                      <  1:4383355/101‑1 (MQ=255)


                            ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAtt                                                                      <  2:3866851/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAttt                                                                     <  1:2044400/101‑1 (MQ=255)


                              ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTg                                                                    <  1:4083347/101‑1 (MQ=255)


                                gccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGGTCCGCCCCCCCACCCCCCGCGGATTTGcc                                                                  >  2:4144073/1‑100 (MQ=37)


                                gccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCCCCGCCCCCCCACCCCCCGCGGATTTTCa                                                                  >  1:395046/1‑101 (MQ=25)


                                 ccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.c                                                                <  1:2999525/101‑1 (MQ=255)


                                   ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCa                                                              <  1:516678/101‑1 (MQ=255)


                                    tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAg                                                             <  1:524551/101‑1 (MQ=255)


                                       ggcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaa                                                          <  1:3993448/101‑1 (MQ=255)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGTCGGCCCGGC..GGGGGCTCCGCCCCCGCCCCCCCGGCGTATTTGCA.CCAGGaaa                                                         <  1:3449791/101‑1 (MQ=37)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaaa                                                         <  1:578135/101‑1 (MQ=255)


                                        gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaaa                                                         <  1:2107101/101‑1 (MQ=255)


                                         cggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaaaa                                                        <  2:1804386/101‑1 (MQ=255)


                                          ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGGGG..CCCCCCCCGCACCCCCGGCGGATTTGCA.CCAGGGaaag                                                       >  1:1364968/1‑101 (MQ=37)


                                          ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCCGCGGATTTGCA.CCAGGAaaag                                                       >  2:2750414/1‑101 (MQ=37)


                                           gcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagc                                                      <  1:1166996/101‑1 (MQ=255)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagcca                                                    <  1:3343863/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagccaaa                                                  <  1:146403/101‑1 (MQ=255)


                                                ttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagccaaag                                                 <  1:688822/101‑1 (MQ=255)


                                                     tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCggc                                            >  2:1541849/1‑99 (MQ=37)


                                                     tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTc                                            <  1:3618813/101‑1 (MQ=255)


                                                        gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTcccc                                         <  1:1808962/101‑1 (MQ=255)


                                                          gcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCgg                                       <  1:1633461/101‑1 (MQ=255)


                                                          gcgAAAGCGTTTCCACTTGGCTTCGCCAAGGCGCCCCGGC..GTGGGCTCCGCCCCCGCCCCCCCGGCGTATTTGCA.CCAGGAATACCCAAAGCCGTCCCCgg                                       <  2:1457121/101‑1 (MQ=255)


                                                           cgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGc                                      >  1:4402559/1‑101 (MQ=255)


                                                            gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCa                                     <  2:4279613/101‑1 (MQ=255)


                                                             aaaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCCCCGCCCCCCCAACCCCCGCGTATTTGCACCCAGGAaaagccaaaccccgcccggccg                                     >  2:856210/1‑91 (MQ=19)


                                                                 cGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAcc                                <  2:2542432/101‑1 (MQ=255)


                                                                   tttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGa                              <  1:2196068/101‑1 (MQ=255)


                                                                    ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                             <  1:3424278/101‑1 (MQ=255)


                                                                    ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                             <  1:846136/101‑1 (MQ=255)


                                                                    ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGCATTTGCA.CCAGGAAAAGCCAAAGCCGTGCCCGACAAGACCCaa                             >  2:1893517/1‑101 (MQ=21)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  2:1867029/101‑1 (MQ=255)


                                                                      cGCCGTGGCTTCGCCAGGGCGTCCCGGC..GGGGGGTCCGCCCCCCCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  2:4187904/101‑1 (MQ=37)


                                                                        ccTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGcc                         <  2:119783/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  2:3082122/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  1:2222417/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  2:4041302/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  1:3925147/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  2:4128582/101‑1 (MQ=255)


                                                                          ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  1:1231645/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  2:1712968/101‑1 (MQ=255)


                                                                           tGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  1:1265040/101‑1 (MQ=255)


                                                                            ggCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCCCACCCCCGGCGGATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCCCAg                     >  1:1295297/1‑101 (MQ=37)


                                                                             gCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    <  1:538815/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  2:4278024/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  2:2833617/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  1:3591466/101‑1 (MQ=255)


                                                                                    cAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg             <  2:121011/101‑1 (MQ=255)


                                                                                    cAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg             <  2:335327/101‑1 (MQ=255)


                                                                                    cAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg             <  2:2916542/101‑1 (MQ=255)


                                                                                          gACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       <  1:1309582/101‑1 (MQ=255)


                                                                                          gACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       <  1:1529270/101‑1 (MQ=255)


                                                                                          gACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt       <  1:2645821/101‑1 (MQ=255)


                                                                                            cccGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt     <  2:967647/101‑1 (MQ=255)


                                                                                             ccGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt    <  1:4228969/101‑1 (MQ=255)


                                                                                              cggc..ggGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:1802013/101‑1 (MQ=255)


                                                                                              cggc..ggGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:3429226/101‑1 (MQ=255)


                                                                                               ggc..ggGGGCTCCGCCCCCGCACCCCCGGCGTTTTTTGC.CCAGGAAAAGGCAAAACCGTCCCCGGCAGGACCCGAGGACACACGACCACGGGCCCCTTTTAt  >  2:2833219/1‑101 (MQ=9)


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGG..CCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG