BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2330179 =	40 (0.230)	13 (0.070)	2/154	31.5	0.18	intergenic (+154/+158)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	= 2577171	82 (0.360)	13 (0.070)	2/154	31.5	0.18	intergenic (+93/‑336)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 109 total aligned reads displayed.


CGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGG..CCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAAT  >  NC_014034/2577082‑2577270


cgcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAcc                                                                                             <  2:815515/101‑1 (MQ=255)


 gcgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccc                                                                                            <  2:2917079/101‑1 (MQ=255)


  ctattaaaCGTCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAcccc                                                                                           <  2:3634523/96‑1 (MQ=25)


  cgATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..CGGGG..GGGCCCCCCCCcccccc                                                                                         >  2:213335/1‑100 (MQ=255)


   gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                                          <  2:3290869/101‑1 (MQ=255)


   gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                                          <  1:684887/101‑1 (MQ=255)


   gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                                          <  1:2562181/101‑1 (MQ=255)


   gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCAccccc                                                                                          <  2:3374074/101‑1 (MQ=255)


    aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                                         <  2:4214129/101‑1 (MQ=255)


    aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                                         <  2:3874169/101‑1 (MQ=255)


    aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                                         <  2:884536/101‑1 (MQ=255)


    aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCg                                                                                         <  1:973041/101‑1 (MQ=255)


     tGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCgg                                                                                        <  1:3677634/101‑1 (MQ=255)


     ggAAGCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCgg                                                                                        <  2:3388297/100‑1 (MQ=37)


      gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGc                                                                                       <  2:2099717/101‑1 (MQ=255)


      gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGc                                                                                       <  1:1750676/101‑1 (MQ=255)


      gAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGc                                                                                       <  1:3123403/101‑1 (MQ=255)


       aaccGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCg                                                                                      <  2:4155695/98‑1 (MQ=37)


        aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGCCCCGGC..GGGGGCTCCGCCCCCGCCCCCCCGGCGt                                                                                     <  2:3147694/101‑1 (MQ=37)


           ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAtt                                                                                  <  1:4383355/101‑1 (MQ=255)


           ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAtt                                                                                  <  2:3866851/101‑1 (MQ=255)


            gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTAttt                                                                                 <  1:2044400/101‑1 (MQ=255)


             ccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTg                                                                                <  1:4083347/101‑1 (MQ=255)


               gccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCCCCGCCCCCCCACCCCCCGCGGATTTTCa                                                                              >  1:395046/1‑101 (MQ=25)


                ccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.c                                                                            <  1:2999525/101‑1 (MQ=255)


                   tCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAg                                                                         <  1:524551/101‑1 (MQ=255)


                      ggcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaa                                                                      <  1:3993448/101‑1 (MQ=255)


                       gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGTCGGCCCGGC..GGGGGCTCCGCCCCCGCCCCCCCGGCGTATTTGCA.CCAGGaaa                                                                     <  1:3449791/101‑1 (MQ=37)


                       gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaaa                                                                     <  1:2107101/101‑1 (MQ=255)


                       gcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaaa                                                                     <  1:578135/101‑1 (MQ=255)


                        cggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGaaaa                                                                    <  2:1804386/101‑1 (MQ=255)


                         ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCGGGGGGG..CCCCCCCCGCACCCCCGGCGGATTTGCA.CCAGGGaaag                                                                   >  1:1364968/1‑101 (MQ=37)


                         ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCCGCGGATTTGCA.CCAGGAaaag                                                                   >  2:2750414/1‑101 (MQ=37)


                          gcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagc                                                                  <  1:1166996/101‑1 (MQ=255)


                            cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagcca                                                                <  1:3343863/101‑1 (MQ=255)


                              tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagccaaa                                                              <  2:3827612/101‑1 (MQ=255)


                              tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagccaaa                                                              <  1:146403/101‑1 (MQ=255)


                               ttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAaaagccaaag                                                             <  1:688822/101‑1 (MQ=255)


                                    tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCggc                                                        >  2:1541849/1‑99 (MQ=37)


                                    tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTc                                                        <  1:3618813/101‑1 (MQ=255)


                                       gcgcGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTcccc                                                     <  1:1808962/101‑1 (MQ=255)


                                         gcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCgg                                                   <  1:1633461/101‑1 (MQ=255)


                                         gcgAAAGCGTTTCCACTTGGCTTCGCCAAGGCGCCCCGGC..GTGGGCTCCGCCCCCGCCCCCCCGGCGTATTTGCA.CCAGGAATACCCAAAGCCGTCCCCgg                                                   <  2:1457121/101‑1 (MQ=255)


                                          cgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGc                                                  >  1:4402559/1‑101 (MQ=255)


                                           gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCa                                                 <  2:4279613/101‑1 (MQ=255)


                                            aaaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAg                                                <  1:3268865/101‑1 (MQ=255)


                                            aaaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCCCCGCCCCCCCAACCCCCGCGTATTTGCACCCAGGAaaagccaaaccccgcccggccg                                                 >  2:856210/1‑91 (MQ=19)


                                              aGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGa                                              <  1:4237399/101‑1 (MQ=255)


                                                cGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGAcc                                            <  2:2542432/101‑1 (MQ=255)


                                                  tttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGa                                          <  1:2196068/101‑1 (MQ=255)


                                                   ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                                         <  1:846136/101‑1 (MQ=255)


                                                   ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                                         <  1:3424278/101‑1 (MQ=255)


                                                   ttCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGCATTTGCA.CCAGGAAAAGCCAAAGCCGTGCCCGACAAGACCCaa                                         >  2:1893517/1‑101 (MQ=21)


                                                     cGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                                       <  2:1867029/101‑1 (MQ=255)


                                                     cGCCGTGGCTTCGCCAGGGCGTCCCGGC..GGGGGGTCCGCCCCCCCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                                       <  2:4187904/101‑1 (MQ=37)


                                                       ccTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGcc                                     <  2:119783/101‑1 (MQ=255)


                                                        cTTGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCt                                    <  2:1446937/101‑1 (MQ=255)


                                                         ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  2:3082122/101‑1 (MQ=255)


                                                         ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  2:4041302/101‑1 (MQ=255)


                                                         ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  2:4128582/101‑1 (MQ=255)


                                                         ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  1:3925147/101‑1 (MQ=255)


                                                         ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  1:2222417/101‑1 (MQ=255)


                                                         ttGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  1:1231645/101‑1 (MQ=255)


                                                          tGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                                  <  2:1712968/101‑1 (MQ=255)


                                                          tGGCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                                  <  1:1265040/101‑1 (MQ=255)


                                                           ggCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCCCACCCCCGGCGGATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCCCAg                                 >  1:1295297/1‑101 (MQ=37)


                                                            gCTTCGCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                                <  1:538815/101‑1 (MQ=255)


                                                                 gCCAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc                           <  2:4278024/101‑1 (MQ=255)


                                                                  ccAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                          <  1:3591466/101‑1 (MQ=255)


                                                                  ccAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                          <  2:2833617/101‑1 (MQ=255)


                                                                   cAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg                         <  2:121011/101‑1 (MQ=255)


                                                                   cAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg                         <  2:2916542/101‑1 (MQ=255)


                                                                   cAAGGCGACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg                         <  2:335327/101‑1 (MQ=255)


                                                                         gACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt                   <  1:1309582/101‑1 (MQ=255)


                                                                         gACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt                   <  2:2666920/101‑1 (MQ=255)


                                                                         gACCCGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCt                   <  1:1529270/101‑1 (MQ=255)


                                                                           cccGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt                 <  2:967647/101‑1 (MQ=255)


                                                                            ccGGC..GGGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCtttt                <  1:4228969/101‑1 (MQ=255)


                                                                             cggc..ggGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa               <  1:1802013/101‑1 (MQ=255)


                                                                             cggc..ggGGGCTCCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa               <  1:3429226/101‑1 (MQ=255)


                                                                              ggc..ggGGGCTCCGCCCCCGCACCCCCGGCGTTTTTTGC.CCAGGAAAAGGCAAAACCGTCCCCGGCAGGACCCGAGGACACACGACCACGGGCCCCTTTTAt              >  2:2833219/1‑101 (MQ=9)


                                                                                  cgggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCt            >  2:88268/9‑101 (MQ=255)


                                                                                  cgggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCt            <  1:1594480/93‑1 (MQ=255)


                                                                                  cgggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCt            <  1:4233757/93‑1 (MQ=255)


                                                                                   gggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCtt           <  1:2047465/94‑1 (MQ=255)


                                                                                   gggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCtt           <  1:511794/94‑1 (MQ=255)


                                                                                    ggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTg          >  2:641467/7‑101 (MQ=255)


                                                                                    ggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTg          <  2:4002318/95‑1 (MQ=255)


                                                                                    ggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTg          <  2:2608154/95‑1 (MQ=255)


                                                                                    ggggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTg          <  2:3185324/95‑1 (MQ=255)


                                                                                     gggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGc         <  1:172724/96‑1 (MQ=255)


                                                                                     gggctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGc         >  2:2855578/6‑101 (MQ=255)


                                                                                       gctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGccc       <  1:465551/98‑1 (MQ=255)


                                                                                        ctccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCa      <  1:1593255/99‑1 (MQ=255)


                                                                                         tccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaa     <  1:73080/100‑1 (MQ=255)


                                                                                          ccgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaaa    <  1:3735346/101‑1 (MQ=255)


                                                                                           cgccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaaaa   <  2:1749856/101‑1 (MQ=255)


                                                                                            gccCCCTCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat  <  1:1029065/101‑1 (MQ=255)


                                                                                            gccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat  >  1:607495/1‑101 (MQ=255)


                                                                                            gccCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat  <  1:2298744/101‑1 (MQ=255)


CGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC..GGGGG..CCGCCCCCGCACCCCCGGCGTATTTGCA.CCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAAT  >  NC_014034/2577082‑2577270

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG