New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 233029028 (0.140)22 (0.110) 17/180 22.1 0.32 intergenic (+265/+47) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
?NC_014034 3276374 = 64 (0.280)intergenic (‑126/+123) RCAP_rcc03082/RCAP_rcc03083 lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

ACGGTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAACGCGAAGGGA  >  NC_014034/3276274‑3276474
                                                                                                           |                                                                                                               
aCGGTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.g                                                                                                                 <  1:2506471/101‑1 (MQ=255)
 gggTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg                                                                                                                <  2:64837/100‑1 (MQ=255)
 cGGTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg                                                                                                                <  2:1495722/101‑1 (MQ=255)
  ggTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg.g                                                                                                              <  2:1550347/101‑1 (MQ=255)
  ggTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg.g                                                                                                              >  1:1560765/1‑101 (MQ=255)
  ggTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg.g                                                                                                              >  1:18698/1‑101 (MQ=255)
   gTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg.gg                                                                                                             <  2:1404174/101‑1 (MQ=255)
    tAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg.ggg                                                                                                            <  2:1910826/101‑1 (MQ=255)
    tAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.gg.ggg                                                                                                            <  2:2321452/101‑1 (MQ=255)
     agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGc                                                                                                           <  1:2354742/101‑1 (MQ=255)
     agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGc                                                                                                           >  1:3152812/1‑101 (MQ=255)
     agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGc                                                                                                           <  1:1601871/101‑1 (MQ=255)
     agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGc                                                                                                           >  1:1503479/1‑101 (MQ=255)
     agcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGc                                                                                                           <  2:847209/101‑1 (MQ=255)
      gcagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCg                                                                                                          >  2:894638/1‑101 (MQ=255)
       cagcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCgg                                                                                                         >  2:663385/1‑101 (MQ=255)
         gcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAg                                                                                                       >  1:264428/1‑101 (MQ=255)
         gcCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAg                                                                                                       <  2:494751/101‑1 (MQ=255)
          ccTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGc                                                                                                      <  1:894723/101‑1 (MQ=255)
          ccTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGc                                                                                                      <  2:3701506/101‑1 (MQ=255)
          ccTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGc                                                                                                      <  2:996703/101‑1 (MQ=255)
          ccTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGAC.C.GG.GGGCGGAGc                                                                                                      >  2:2012141/1‑101 (MQ=255)
           cTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGcc                                                                                                     <  2:2393895/101‑1 (MQ=255)
            tGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGccc                                                                                                    >  2:3505111/1‑101 (MQ=255)
             gCACGCCCGGGGCAAAGTCAAATGCGTGCCAAGGCGCGTAGGGCAACCGGACCCCG.TTTCTTCTTG.GCCC.AAA.CACGC.CGGGGGTC.C.GG.GGGCCGAGtccg                                                                                                   <  2:4410080/101‑2 (MQ=9)
             gCACGACGGGGGCACGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGcccc                                                                                                   <  1:3844901/101‑1 (MQ=255)
             gCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGcccc                                                                                                   <  2:3478482/101‑1 (MQ=255)
                 gacgGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCACG.TTTCTTCTCG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCc...ggc                                                                                            >  2:3555087/1‑101 (MQ=255)
                    gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.ggg                                                                                        >  2:468306/1‑101 (MQ=255)
                    gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.ggg                                                                                        >  2:3198909/1‑101 (MQ=255)
                     ggggcaaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.gggg                                                                                       >  2:1867217/1‑100 (MQ=255)
                     ggggcaaggggcaaTGCGGCGAAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.gggg                                                                                       >  2:2976581/1‑100 (MQ=255)
                          aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.gggggggcc                                                                                  >  1:2325563/1‑95 (MQ=255)
                          aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.ggggggccc                                                                                  >  2:1134030/1‑95 (MQ=255)
                          aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.ggggggccc                                                                                  >  2:4199614/1‑95 (MQ=255)
                          aaggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGccccg                                                                                  >  1:4279331/1‑101 (MQ=255)
                           aggggcaaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGCGGGGTcgccc                                                                                  >  1:505400/1‑100 (MQ=255)
                                 aaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGgccgcg.cgggg                                                                          >  1:356045/1‑99 (MQ=255)
                                 aaTGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGgccgcg.cgggc                                                                          >  2:2407293/1‑99 (MQ=255)
                                     cggcgCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCggcgcg.cggccgcg.c                                                                     >  2:2793469/1‑101 (MQ=255)
                                         gcAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGCCGCC.CGGCCGCg.c.ggc.g                                                               >  1:1947903/1‑101 (MQ=255)
                                          gcaccccccccGGGTCACGCCCCCCCGTTTTCTCCTTG.CACC.AAA.AGCGC.GGGGGGGC.G.GG.GGGCGGACCCCCC...GGC.GGGTCGCCGCG.CGGCCGCg.c.ggc.g                                                               <  1:2813899/96‑1 (MQ=2)
                                          cagggCCCCCCGGGGACCCGGCCCCCG.TTTCTTCTGG.CCCC.AAA.TCCGC.GGGGGGTC.G.GG.GGGCGGACCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.Ga                                                              <  2:2901612/98‑1 (MQ=14)
                                           aaGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGggcgcg.ccggcgcg.ccgggga                                                               >  1:142661/1‑95 (MQ=17)
                                           aaGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGGCGCG.GCGCCCCg.c.ggc.ggg                                                             >  2:4191915/1‑99 (MQ=17)
                                            aGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGgcgcc.cggccgcc.c.gggggca                                                             >  1:1249961/1‑96 (MQ=17)
                                                 ccccGGGCACCCGCCCCCCT.TTTTTTCTGG.CCCA.AAA.TCCGC.GGGGGGCC.G.GG.GGGGGGCCCCCCG...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAg                                                       <  1:532993/101‑1 (MQ=9)
                                                 ccccGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGCCCCG.CGGGCGCG.G.GGC.GGAACaaaa                                                       >  1:1749759/1‑100 (MQ=17)
                                                 ccccGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGGCGCC.CGGGCGCC.C.GGG.GGGACaaaa                                                       >  1:1195995/1‑100 (MQ=17)
                                                    cGGGCAAGCCGCCCCCT.TTTTTTTCTG.GGCC.AAA.GGCGG.GGGGGGTCGG.GG.GGGCGCCCCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGga                                                     <  2:264401/101‑1 (MQ=9)
                                                     gggCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGGCCCG.CGGGCCCG.C.GGC.GGAAAaaaaaaac                                                   >  2:1380074/1‑96 (MQ=14)
                                                      ggCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGGCCCG.C.GGC.GGGACCAAAga.ccc                                                 >  2:3285896/1‑100 (MQ=14)
                                                        gcaCCGGCCCCCT.TTTTTTTCTG.GCCC.AAA..ACGCGCGGGGGGC.CGGG.GGGGGGGGCCCCG...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGga.ccga                                                <  1:4199875/99‑1 (MQ=9)
                                                          aCCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGGCGCG.CCGGCGCC.C.GGC.GGGACAAAAgaaccgccc                                              >  2:2866324/1‑94 (MQ=14)
                                                          aCCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGGCCCG.CGGGCGGG.C.CGC.GCAACaaaacagccacac                                              >  1:659785/1‑91 (MQ=14)
                                                           ccGCCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCgg                                            <  2:4435366/101‑1 (MQ=255)
                                                            ccgCCCCCT.TTTTTTTCTG.GCCCAAAA.GCCGC.GGGGGGCC.G.GG.GGGCGGCCCCCCG...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCgg                                            <  1:1796859/99‑1 (MQ=9)
                                                                ccccT.TTTTTTTCTG.GCCC.AAAGTCCGC.GGGGGGT..C.GG.GGGCGGGCCCCCCG..GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAg                                        <  1:2976802/101‑1 (MQ=12)
                                                                  ccG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGCCGCC.C.GGG.GGAACAAAAAA.CCGACCCGGGAGccc                                     >  1:1884327/1‑101 (MQ=14)
                                                                   cG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGGC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.GGGGGGGG.G.GGG.GGAACAAAGGG.ACGGCCgggggggggc                                    >  1:558606/1‑94 (MQ=9)
                                                                    g.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGCCCCG.C.GGC.GGAACAAAAGA.CCGACCGGGCGGccccc                                   >  2:2584330/1‑101 (MQ=18)
                                                                        tcttctTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGCCGCG.C.GGC.GGGACAAAAGA.ACGACCCGGCAGcccccccg                                >  1:219105/1‑99 (MQ=17)
                                                                          ttcttGCGCCC.AAA..ACGC.GGGGGGGG.C.GG.GGGGGGGGCCCCCGCGGGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCg                                 <  1:3286128/101‑1 (MQ=16)
                                                                          ttcttG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCCCG.CGGCCGCG.C.GGC.GCCACAAAAGG.CGCACCCGGCAGGCCCCCCGTc                              >  2:720099/1‑101 (MQ=14)
                                                                            cttG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGCCGCG.CGGGCGGG.C.GGG.GGAAAAAAAAA.AAGACCGGGGGGCCCCCCCGCCgg                            >  1:2730380/1‑101 (MQ=2)
                                                                               g.gCCC.AAA.GCCGC.CGGGGGTC.G.GG.GGGCGGAGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCa                         <  2:356010/101‑1 (MQ=255)
                                                                                      aaa.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGCCCCG.CGGCCGCG.C.GGC.GGAAAAAAAGA.CCGACCCGGCCGCCCCCCGGGCGGCCCGGG.aa                   >  1:2055087/1‑101 (MQ=17)
                                                                                       aaagccGC.GGGGGGGC.G.GG.GGGCGGACCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.aa                   <  2:2074781/96‑1 (MQ=25)
                                                                                       aa.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGGCGCGCCGGCCG.G.C.GGC.CGCAAAAAAGA.ACGAACAGGGAGCCCCCCCGTGGGCCacggtac                   >  2:3710121/1‑95 (MQ=9)
                                                                                       aa.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGGCGCGCC.GGG.GAAAAAAAGGA..CGACCCGGCAGGCCCCCCGGCCGCCAGAG.AAc                  >  2:443974/1‑101 (MQ=9)
                                                                                        a.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGGGCCGCG.CGGCCGCG.C.GGCGGAAAAAAAGAA.CGGACGGGGCGGCCCCCCGGCGGGCCGGGG.AAc                  >  2:4171592/1‑101 (MQ=9)
                                                                                              c.cGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGCCGCG.C.CGC.GGAACAAAAGA.CCCACCCGGCCGCCCCCCCGGCGGCCCGTG.GAcccccaa            >  2:1787358/1‑97 (MQ=17)
                                                                                                ggggggAC.C.GGTGGGCGGCGCCCCG...GGC.GAGTCGCCGCG.CGGCCGCG.C.AGC.GAAACAAAGGA.CCGCCCGGGCAGCCCCCCGGTCGGACAGTG.AACCCGaaa            <  1:2533858/100‑1 (MQ=25)
                                                                                                ccgatctC.C.GG.GGGCGGAGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAAc           <  2:935339/95‑1 (MQ=255)
                                                                                                 gggggTC.G.GG.GGGCGGAGCCCCG...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAAcg          <  1:2866927/101‑1 (MQ=255)
                                                                                                   gggTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGGCGCG.C.GGC.GGAACAAAAGA.CCGACCGGGCCGCCCCCCCGGCGGCCCGGG.GACCCGAAAcgcg        >  2:2439999/1‑101 (MQ=21)
                                                                                                   gggTC.C.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGCCGCG.G.CGC.GGAACAAAAGG.ACGACGACGGCGGCCCCCGGCCGGCCCGCGAAACCCGaaagcc         >  2:1031790/1‑98 (MQ=2)
                                                                                                     gggccggg.gggCGGGGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAAcgcg        <  2:4279062/95‑1 (MQ=255)
                                                                                                      tC.C.GG.GGGCGGAGCCCCC...GGC.GGGGAGCCCCG.CGGGCGCG.C.GGC.GGAAAAAAAGA.CCCACCGGGCAGCCCCCCCGGCGGCCAGCG.AACCCCAAAccagcag     >  1:1752847/1‑95 (MQ=16)
                                                                                                       c.c.GG.GGGCGGAGCCCCC...GGC.GGGGGGCCCCG.CGGCCCCG.CGGGG.GAAAAAAAGAA.CCACCCGGGGGGCCCCCCGGCCGGCCGGGG.AACCCGaaaacaaagg     >  1:935424/1‑94 (MQ=12)
                                                                                                       c.c.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CCGCCGCG.C.GGG.GGAACCAAAGA.CCCACCGGGCCGGCCCCCCGTCGGGCCGTGCACCCCGAAAccgcagg     >  2:3910997/1‑95 (MQ=12)
                                                                                                       c.c.GG.GGGCGGAGCCCCC...AGC.GGGTCGCCGCG.CGGGCGCG.A.GGG.GGAACAAAAAAGCAGAAAGGG.AGCCCCCCCCACGGACAGTG.AACACCAAACGCCAAgg    >  2:3674409/1‑101 (MQ=9)
                                                                                                         c.GG.GGGCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCCGGGAGGCCCCCCGGCGGCCCGGG.AACCCCAAACGCGAAggg   >  1:1858636/1‑101 (MQ=21)
                                                                                                          ggg.gggCGGCCCCCCG...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAACGCGAAggg   <  2:142640/100‑1 (MQ=255)
                                                                                                           gg.gggCGGCCCCCCG...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAACGCGAAGGGa  <  1:1867341/101‑1 (MQ=255)
                                                                                                           gg.gggCGGAGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GGAACAAAAGA.CCGACCGGGGCGCCCCCCCGGCGGCCAGCG.AACCCCCAAAGCGAAaggg  >  2:2564237/1‑100 (MQ=18)
                                                                                                           gg.gggCGGAGCCCCC...GGC.GGGGCGCCGCG.CGGGCGCG.C.CGC.GGAAAAAAAGA.CCGACCGGGCAGCCCCCCCGTCGGCCCGCG.AAACCCAAACGCGAAgggg  >  2:435448/1‑100 (MQ=21)
                                                                                                           gg.gggCGGACCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAACGCGAAGGGa  <  1:2407450/101‑1 (MQ=255)
                                                                                                           |                                                                                                               
ACGGTAGCAGCCTGCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGGCAACCGGCCCCCG.TTTCTTCTTG.GCCC.AAA.TACGC.CGGGGGTC.C.GG.GGGCGGAGCCCCC...GGC.GGGTCGCCGCG.CGGCCGCG.C.GGC.GAAACAAAGGA.CCGACCGGGCAGCCCCCCGGTCGGCCAGTG.AACCCGAAACGCGAAGGGA  >  NC_014034/3276274‑3276474

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG