BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408498 =	12 (0.070)	69 (0.410)	22/148	15.9	0.58	intergenic (+116/+32)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 1748566	87 (0.380)	69 (0.410)	22/148	15.9	0.58	intergenic (‑270/‑128)	RCAP_rcc01616/gppA	hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase
Rejected: Position hash score below cutoff.

Only 100 of 139 total aligned reads displayed.


CCCGGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCT  >  NC_014034/1748466‑1748663


cccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGc                                                                                                         <  2:3250318/101‑1 (MQ=255)


cccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGc                                                                                                         <  1:2046997/101‑1 (MQ=255)


 ccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGcc                                                                                                        >  1:2126295/1‑101 (MQ=255)


 ccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGcc                                                                                                        >  1:1887912/1‑101 (MQ=255)


   ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGc                                                                                                      >  2:2293634/1‑101 (MQ=255)


    gTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCa                                                                                                     <  2:3485287/101‑1 (MQ=255)


      cGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAgg                                                                                                   <  1:2924695/101‑1 (MQ=255)


      cGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAgg                                                                                                   >  2:4313122/1‑101 (MQ=255)


        ccTTGCCGTGCGCGGCGGAGCCGCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc                                                                                                 <  1:453171/101‑1 (MQ=255)


        ccTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc                                                                                                 >  1:2208695/1‑101 (MQ=255)


        ccTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc                                                                                                 >  2:1551442/1‑101 (MQ=255)


         cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc.c                                                                                               <  1:2366263/101‑1 (MQ=255)


         cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc.c                                                                                               <  1:2412199/101‑1 (MQ=255)


         cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc.c                                                                                               >  2:2162213/1‑101 (MQ=255)


          ttGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGCGGGAGGCCGCAGGCC.C..g                                                                                            >  2:4011152/1‑101 (MQ=255)


           tGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..gg                                                                                           <  1:1731477/101‑1 (MQ=255)


           tGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..gg                                                                                           >  1:1340030/1‑101 (MQ=255)


           tGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..gg                                                                                           >  2:778799/1‑101 (MQ=255)


              ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGcc.cagatc                                                                                          >  2:3332063/1‑96 (MQ=255)


              ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.gg                                                                                       >  2:2389020/1‑101 (MQ=255)


               cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.ggg                                                                                      >  2:2593409/1‑100 (MQ=255)


               cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.ggg                                                                                      >  2:3190968/1‑100 (MQ=255)


               cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.ggg                                                                                      >  2:4269119/1‑100 (MQ=255)


                tGCGCGGCGGAGCCTCGGGCGGAGGTATTTAGGGAAAGATGAAACGGTCCCCC.TTCATCTTGCCTAAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.gggc                                                                                     <  1:2293779/101‑3 (MQ=38)


                tGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.gggc                                                                                     <  1:2202053/101‑3 (MQ=255)


                  cgcgGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.gggcag                                                                                   <  1:1400599/101‑5 (MQ=255)


                  cgcgGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.gggcag                                                                                   <  1:924350/101‑5 (MQ=255)


                   gcggcgGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..ggg.gggcagc                                                                                  <  1:2767067/101‑6 (MQ=255)


                    cggcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAg.cg                                                                                <  2:802278/101‑1 (MQ=255)


                       cggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGccc                                                                             >  1:2928837/1‑101 (MQ=255)


                       cggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGccc                                                                             >  1:4073047/1‑101 (MQ=255)


                       cggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTCGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGccc                                                                             <  1:3668411/101‑1 (MQ=255)


                        ggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGcccc                                                                            >  2:172229/1‑101 (MQ=255)


                        ggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGcccc                                                                            >  2:4060961/1‑101 (MQ=255)


                        ggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGACGCAGGCC.CG.GGG.GG.CAG.CGcccc                                                                            >  2:1768322/1‑101 (MQ=255)


                         gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGccccc                                                                           >  2:2694861/1‑101 (MQ=255)


                         gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGccccc                                                                           <  1:2970101/101‑1 (MQ=255)


                          aGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGcccccc                                                                          >  1:4120319/1‑101 (MQ=255)


                           gCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCg                                                                         >  2:491657/1‑101 (MQ=255)


                             cTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGcc                                                                       >  2:4143130/1‑101 (MQ=255)


                             cTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGcc                                                                       >  1:1269982/1‑101 (MQ=255)


                             cTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGcc                                                                       >  1:4424672/1‑101 (MQ=255)


                              tCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCt                                                                      >  2:1847021/1‑101 (MQ=255)


                               ccGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCtt                                                                     >  1:159316/1‑101 (MQ=255)


                                cggcggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTg                                                                    >  2:1238573/1‑101 (MQ=255)


                                 ggcggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGc                                                                   >  2:1771710/1‑101 (MQ=255)


                                  gcggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCCTGCt                                                                  >  1:3082578/1‑101 (MQ=255)


                                    ggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCGTc                                                                >  2:3749557/1‑101 (MQ=255)


                                    ggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAC.AGCCCCCCGCCTTGCTTc                                                                >  1:3665696/1‑101 (MQ=37)


                                     gAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCg                                                               >  2:1353451/1‑101 (MQ=255)


                                       ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGc                                                             >  1:2154564/1‑101 (MQ=255)


                                       ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGc                                                             >  2:3604639/1‑101 (MQ=255)


                                       ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGc                                                             >  1:4113767/1‑101 (MQ=255)


                                        gTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGcc                                                            >  2:1451541/1‑101 (MQ=255)


                                         tATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCt                                                           >  1:754778/1‑101 (MQ=255)


                                           tttAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTg                                                         >  2:3786640/1‑101 (MQ=255)


                                           ttgggggAAAGATGACCCGGTCCCCC.TTCCTCTCCCCAAAAATGG.CCG.GGGGGGGGCCCGCGGCCG.G..GGG.GGCCCG.CCCCCCCCGCCTTGCTTCGGCCTTg                                                         <  2:369627/97‑1 (MQ=255)


                                              tgggacaagagAAACGGTCCCCCTTTCTTCTT.CC.CAAAAAT.CCCGGGGGGGGGGGCCCCGGCC.GGGGGG.GG.CCC.CCCCCCCCGCCTTGCTTCGGCCTTGCg                                                       <  2:4158297/91‑1 (MQ=255)


                                              aGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGa                                                      >  1:3258398/1‑101 (MQ=255)


                                               gggCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGAc                                                     >  1:40244/1‑101 (MQ=255)


                                                ggCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACg                                                    >  2:3696913/1‑101 (MQ=255)


                                                   aaGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTcc                                                 >  2:426587/1‑100 (MQ=255)


                                                   aaGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCa                                                 >  2:3582240/1‑101 (MQ=255)


                                                     aaggAAACGGTCCCCC.CTTCTCTT.CCCCAAAAATCCCC.GGGGGGGGGCCGCGGGCCGG..GGG.GG.CCGCCCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCAc                                                <  2:2647240/98‑1 (MQ=255)


                                                      aTGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGTCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGGCTTGCGACGTCACGa                                              >  2:2849821/1‑101 (MQ=37)


                                                      aTGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGa                                              >  2:2939415/1‑101 (MQ=255)


                                                       tGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGaa                                             >  1:975056/1‑101 (MQ=255)


                                                       tGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGaa                                             >  1:3647364/1‑101 (MQ=255)


                                                        gAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAAc                                            >  2:1635170/1‑101 (MQ=255)


                                                        gAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAAc                                            >  2:3623894/1‑101 (MQ=255)


                                                         aaaCGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGCCCCGAACt                                           >  1:4312555/1‑101 (MQ=37)


                                                              gTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCa                                      >  1:2777734/1‑101 (MQ=255)


                                                               tGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt                                     >  2:732834/1‑101 (MQ=255)


                                                                gCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATc                                    >  2:3700764/1‑101 (MQ=255)


                                                                  ccc.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCgg                                  >  2:2433724/1‑101 (MQ=255)


                                                                   cc.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..GGGAGG.CAG.CGCCCCCCGCCTTGCTTCGGCCCTGCGACGTCACGAACTTGTCATCggg                                 >  2:3850091/1‑101 (MQ=255)


                                                                    c.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgc                                >  2:3132105/1‑101 (MQ=255)


                                                                    c.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgc                                >  1:771848/1‑101 (MQ=255)


                                                                        cATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCCTGCGACGTCACGAACTTGTCATCGGGCGCt                             >  1:312937/1‑101 (MQ=255)


                                                                         ttCTGGCCTAAAATAC.CCG.GGGGGGGGGCCGCAGGCCGG..GGG.GG.CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCtt                            <  2:1281602/100‑1 (MQ=255)


                                                                          tctgcccccAAATCC.CCG.GGGGGGAGCCCGCGGGCCGG..GGG.GG.CAG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTg                           <  2:2034918/93‑1 (MQ=255)


                                                                           cTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCTGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGTGCGCTTGa                          >  2:711006/1‑101 (MQ=38)


                                                                           cTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa                          >  1:2057146/1‑101 (MQ=255)


                                                                           cTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa                          >  2:1055080/1‑101 (MQ=255)


                                                                             tGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAc                        >  2:1701675/1‑101 (MQ=255)


                                                                              gCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAcc                       >  1:3446906/1‑101 (MQ=255)


                                                                                cTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCtt                     >  1:2727479/1‑101 (MQ=255)


                                                                                       at.CCC.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCCTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccc              >  2:1570255/1‑101 (MQ=255)


                                                                                          ccc.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc            >  1:1666222/1‑101 (MQ=255)


                                                                                          ccc.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc            >  2:197861/1‑101 (MQ=255)


                                                                                           cc.GGGGGGGGGCCGCGGGCCGG..GGG.GG.CCG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccccc           <  1:2939636/101‑1 (MQ=255)


                                                                                           cc.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccccc           >  2:1240649/1‑101 (MQ=255)


                                                                                            c.GGGGGGAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcg          >  1:2121996/1‑101 (MQ=255)


                                                                                              ggggggAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgc         >  1:3421793/1‑101 (MQ=255)


                                                                                               gggggAGGCCGCAGGCCGG..GGG.GG.CCG.CCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgcg        <  2:2154425/101‑1 (MQ=255)


                                                                                               gggggAGGCCGCAGGCC.CG.GGG.GG.GAG.CGCCCCCCCCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCCGGCGCTTGAACCTTCGGCCCCCCcccg        >  1:1642200/1‑101 (MQ=255)


                                                                                                  ggAGGCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTa     >  1:4399599/1‑101 (MQ=255)


                                                                                                    aGGCCGCAGGCC.CG.GGG.GG.CAG.CGGCCCCCGCCTTGCTTCGGCCCTGCCACGTCACGAACATGTCATCGGGCGCTTGAACCTTCGTCCCCCGCGCGCGAcc   >  2:4441017/1‑101 (MQ=255)


                                                                                                     ggCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCccgccccct  >  1:3286537/1‑96 (MQ=255)


                                                                                                     ggCCGCAGGCC.CG.GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCt  >  2:614081/1‑101 (MQ=255)


CCCGGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATAT.CCC.GGGGGGAGGCCGCAGGCC.C..GGG.GG.CAG.CGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCT  >  NC_014034/1748466‑1748663

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG