BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 440018	138 (0.670)	43 (0.210)	6/182	30.2	0.28	intergenic (+53/+3)	RCAP_rcc00411/RCAP_rcc00412	S58 family peptidase/arylformamidase
*	?	NC_014034	1640015 =	79 (0.350)	43 (0.210)	6/182	30.2	0.28	intergenic (+95/‑50)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 122 total aligned reads displayed.


CGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....G.....G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639925‑1640115


cgagccccccGGGGGGGATATTGGGGGAAAGATAAACCCCATCCCTTTCATCTTGCCCAAAATACCCGGGGGGGCCGGGG....GGGCA.G.....C..G....CCCCCCG.CCACtt                                                                                                <  2:2552939/93‑1 (MQ=2)


    gCCTCCGGCGGGGGTATTTGGGGCAAAATGGAACCCATCCCCTTAATCTTGCCCCAAATATCCCGGGGGGCCCGGGGGGCG.....G.....C..G....CCCCCCG.CCACTTCCGc                                                                                            >  2:1036846/1‑101 (MQ=18)


        ccGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACg                                                                                        >  2:2502061/1‑101 (MQ=21)


            cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGc                                                                                    >  2:1605325/1‑101 (MQ=25)


            cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGc                                                                                    >  2:2889035/1‑101 (MQ=25)


            cggGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGc                                                                                    >  2:3046532/1‑101 (MQ=25)


             ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCa                                                                                   >  1:361981/1‑101 (MQ=25)


             ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCa                                                                                   >  2:3061947/1‑101 (MQ=25)


             ggggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCa                                                                                   >  2:3225294/1‑101 (MQ=25)


               ggATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAgc                                                                                 >  2:1327615/1‑101 (MQ=25)


                gATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAgcg                                                                                >  1:134956/1‑101 (MQ=25)


                gATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAgcg                                                                                >  1:2499140/1‑101 (MQ=25)


                  tatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGcc                                                                              >  2:34941/1‑101 (MQ=25)


                  tatTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGCGGCAGCGcc                                                                              >  2:2289237/1‑101 (MQ=21)


                   atTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGccc                                                                             >  1:1050663/1‑101 (MQ=25)


                    tttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGcccc                                                                            >  2:585541/1‑101 (MQ=21)


                    tttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGcccc                                                                            >  2:170794/1‑101 (MQ=25)


                     ttGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCg                                                                           >  1:1110828/1‑101 (MQ=21)


                         ggCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCg                                                                       >  1:1918563/1‑101 (MQ=25)


                           cAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  2:3268462/1‑101 (MQ=25)


                           cAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     >  2:2376427/1‑101 (MQ=25)


                            aaagataaaCCCCTCCCTTTCCTTCTCCCCCAAACTCCCGGGGGGGCCCGGG....G.....GGGCCCC..C....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt                                                                     <  2:3548955/95‑1 (MQ=255)


                            aaGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                                                    >  2:928793/1‑101 (MQ=25)


                             aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTgc                                                                   >  2:1326681/1‑100 (MQ=21)


                             aGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa                                                                   >  1:307894/1‑101 (MQ=25)


                              gacgacccccACCCTTTTCACCTCCCCCAAAAGACCCGGGGGGGCCGGGG....G.....G.....C..CCCCCCCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGAc                                                                  <  2:414290/94‑1 (MQ=255)


                                 aaccccccccccTTTC.TCTTGCCCAAAATTGCCGGGGGGGCCGGGG....G.....GGGCCCC..C....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                                               <  2:1156847/92‑1 (MQ=255)


                                  aaaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  1:666993/1‑101 (MQ=25)


                                  aaaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                                              >  2:2497095/1‑101 (MQ=25)


                                   aaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGTGGCAGCGCCCCCGCCGTTGACGAAgg                                                             >  2:2972586/1‑101 (MQ=18)


                                   aaCCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                                             >  2:3182954/1‑101 (MQ=25)


                                      ccctCCCTTTTCTCCTTCCCCAAAATGCCCGGGGGGCCCGGG....G.....GGGC..C..GCC..CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                                                           <  1:3708423/98‑1 (MQ=255)


                                       cgtctttttCACCTTGGCCCAAATAGCCCGGGGCTCGGGGG....G.....G.....CCAGCC..CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                         <  2:576590/95‑1 (MQ=255)


                                       cctCCCTTTCCTTCTGCCCCAAATTCCCCGGGGGGCCGGGG....G.....GGC...C..GCCC.CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgaga                                                          <  1:4327197/99‑1 (MQ=255)


                                       cATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                                                         >  1:3224075/1‑101 (MQ=25)


                                       cATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCCGCCGTTGACGAAGgaggc                                                         >  1:3769237/1‑99 (MQ=21)


                                        aTCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                        >  1:4165218/1‑101 (MQ=25)


                                        aTCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc                                                        >  1:996336/1‑101 (MQ=25)


                                         cccttttCCTCTCCCCCCAAATCCCCGGGGGGGCCGGGG....G.....GGCAC.C..C....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg                                                       <  1:1395202/97‑1 (MQ=255)


                                            cTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa                                                    >  1:4185411/1‑101 (MQ=25)


                                             tttCGTCTTGCCCCAAATA.CCGGGGGGGCCGGGG....GGGGCAG.....C..C....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                   <  2:2991796/101‑1 (MQ=255)


                                             tttCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                   >  1:1348068/1‑101 (MQ=25)


                                             tttCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                                                   >  2:2949176/1‑101 (MQ=25)


                                              ttCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                                                  >  2:1132183/1‑101 (MQ=25)


                                                 aTCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                               >  1:2541996/1‑101 (MQ=25)


                                                 aTCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                                               >  2:3199038/1‑101 (MQ=25)


                                                  tCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                              >  1:3410791/1‑101 (MQ=25)


                                                  tCTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc                                              >  2:3063283/1‑101 (MQ=25)


                                                   cTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                             >  2:1631071/1‑101 (MQ=25)


                                                   cTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                                             >  2:473330/1‑101 (MQ=25)


                                                   cTTGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCCGTGACGGAGGGGGCCCCGCTGTTTCa                                             >  2:841184/1‑101 (MQ=16)


                                                    ttGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGGGACCGCGATGTTTCaa                                            >  2:884845/1‑101 (MQ=25)


                                                    ttGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                                            >  2:309034/1‑101 (MQ=25)


                                                     tGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                           >  1:4352643/1‑101 (MQ=25)


                                                     tGCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCAGCCGTTGACGAAGGAGACCGCGATGTTTCaaa                                           >  1:1886487/1‑101 (MQ=25)


                                                      gCCCCAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaa                                          >  1:1805490/1‑101 (MQ=25)


                                                       ccccAGATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaaaa                                         >  1:865870/1‑100 (MQ=25)


                                                        cccAAATATCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa                                        >  1:4190192/1‑101 (MQ=25)


                                                          cAAATATCCCGGGGGGCCCGGG....GGGGA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc                                      >  2:3054581/1‑101 (MQ=37)


                                                             atatCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg                                   >  1:3411153/1‑101 (MQ=37)


                                                               atCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt                                 >  1:4387768/1‑101 (MQ=37)


                                                               atCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGCCCGTTGTCGAAGGAGACCGCGCTGTTCTAAAAGATCCTGac                                 >  1:3907891/1‑100 (MQ=21)


                                                                tCCCGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATc                                >  2:1498276/1‑101 (MQ=37)


                                                                  ccGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc                              >  2:1621041/1‑101 (MQ=37)


                                                                  ccGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc                              >  1:2873755/1‑101 (MQ=37)


                                                                   cGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  2:496413/1‑101 (MQ=37)


                                                                   cGGGGGGCCCGGG....GGGCA.G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGcc                             >  1:479916/1‑101 (MQ=37)


                                                                                ccggggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc                     >  2:2557792/11‑101 (MQ=255)


                                                                                ccggggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc                     >  2:2692596/11‑101 (MQ=255)


                                                                                 cggggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc                    >  1:2777056/10‑101 (MQ=255)


                                                                                  ggggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  2:1149489/9‑101 (MQ=255)


                                                                                  ggggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg                   >  1:2067289/9‑101 (MQ=255)


                                                                                   gggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCga                  >  2:3942957/8‑101 (MQ=255)


                                                                                   gggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCC.GATCCGCAACAAGGcccgg                 >  2:2061322/8‑98 (MQ=255)


                                                                                    ggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                 >  1:1106617/7‑101 (MQ=255)


                                                                                    ggggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgag                 >  2:2964591/7‑101 (MQ=255)


                                                                                      ggcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt               >  1:3182644/5‑101 (MQ=255)


                                                                                       gcag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc              >  1:1204484/4‑101 (MQ=255)


                                                                                         ag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc            >  1:2505123/2‑101 (MQ=255)


                                                                                         ag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc            >  1:4175358/2‑101 (MQ=255)


                                                                                         ag.....c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc            >  2:1402525/2‑101 (MQ=255)


                                                                                                gggcccccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                <  2:1367395/93‑1 (MQ=255)


                                                                                                ggccccccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                <  2:3929188/93‑1 (MQ=255)


                                                                                                gcccccccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga                <  2:1907491/93‑1 (MQ=255)


                                                                                                c..g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCt          >  1:2616486/1‑101 (MQ=255)


                                                                                                 ggcgcccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt               <  2:2913439/94‑1 (MQ=255)


                                                                                                 gccccccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt               <  2:1106529/94‑1 (MQ=255)


                                                                                                  cccccccccccgG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc              <  2:3410554/95‑1 (MQ=255)


                                                                                                   g....cCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg         >  1:3719308/1‑101 (MQ=255)


                                                                                                   ccgccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             <  2:2901461/96‑1 (MQ=255)


                                                                                                   cccccccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg             <  1:3268694/96‑1 (MQ=255)


                                                                                                     cccccccccC.CCACTGCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGcc           <  2:3166679/98‑1 (MQ=255)


                                                                                                        ccccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt        <  2:666925/101‑1 (MQ=255)


                                                                                                         cccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       >  1:1383820/1‑101 (MQ=255)


                                                                                                         cccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       <  1:4145188/101‑1 (MQ=255)


                                                                                                         cccccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       <  1:1195610/101‑1 (MQ=255)


                                                                                                          ccccGCCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc       <  1:947855/101‑1 (MQ=255)


                                                                                                            ccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg    <  2:1746064/101‑1 (MQ=255)


                                                                                                            ccG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCcgg    <  1:2557955/101‑1 (MQ=255)


                                                                                                              g.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTg  >  1:1442318/1‑101 (MQ=255)


CGATGCCTCCGGCGGGGATATTTGGGGCAAGATGAAACCCATCCCTTTCATCTTGCCCCAAATATCCCGGGGGGCCCGGG....G.....G.....C..G....CCCCCCG.CCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGTG  >  NC_014034/1639925‑1640115

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG