BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,398,031	1	.→T	0.9%	0.8 ‑0.7 ‑0.1	214	intergenic (+335/+1563)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand): new base (0/2): ref base (106/106): total (106/108)
Fisher's exact test strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.80e-01

Only 100 of 239 total aligned reads displayed.


AAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATT  >  NC_014034/1397931‑1398131


aaaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCgg                                                                                                      <  1:1082674/101‑1 (MQ=255)


aaaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCgg                                                                                                      >  1:1226061/1‑101 (MQ=255)


 aaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGa                                                                                                     >  1:1229263/1‑101 (MQ=255)


 aaCTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGa                                                                                                     <  2:1597002/101‑1 (MQ=255)


    tctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCa                                                                                                  >  1:4330708/1‑101 (MQ=255)


    tctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCa                                                                                                  >  1:1545365/1‑101 (MQ=255)


    tctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCa                                                                                                  <  2:2077616/101‑1 (MQ=255)


     ctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCaa                                                                                                 >  1:797135/1‑101 (MQ=255)


     ctATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCaa                                                                                                 >  1:3783932/1‑101 (MQ=255)


       aTGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGt                                                                                               >  1:3114680/1‑101 (MQ=255)


       aTGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGt                                                                                               <  1:4117647/101‑1 (MQ=255)


        tGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTc                                                                                              <  1:2295797/101‑1 (MQ=255)


        tGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTc                                                                                              >  1:3945099/1‑101 (MQ=255)


         gggaggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCg                                                                                             <  2:3207980/101‑1 (MQ=255)


         gggaggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCg                                                                                             >  2:3728212/1‑101 (MQ=255)


            aggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTc                                                                                          >  1:2675029/1‑101 (MQ=255)


            aggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTc                                                                                          >  1:2149715/1‑101 (MQ=255)


             ggctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcc                                                                                         <  1:2984934/101‑1 (MQ=255)


               ctagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccc                                                                                       <  1:3528678/101‑1 (MQ=255)


                tagggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTccccc                                                                                      >  2:1308180/1‑101 (MQ=255)


                 agggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccccc                                                                                     >  2:3959352/1‑101 (MQ=255)


                 agggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTcccccc                                                                                     <  1:517743/101‑1 (MQ=255)


                  gggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCcg                                                                                    >  1:3750310/1‑101 (MQ=255)


                  gggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCcg                                                                                    <  1:3355578/101‑1 (MQ=255)


                   ggaggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCcgc                                                                                   >  1:3510080/1‑101 (MQ=255)


                     aggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGGAAGCCGCTccccccccag                                                                                 >  2:1138896/1‑97 (MQ=255)


                     aggctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCgg                                                                                 <  1:1194782/101‑1 (MQ=255)


                     aggataCGCACCTTCAAAAGTCGATCCCCCCGCGAGGGCGTGGATAAAAACCGCCGCACAAAAAGACAGCAAAAGAGAGGAGCAAGTCGCTCCCCCCGCgg                                                                                 >  2:2181648/1‑101 (MQ=255)


                       gctaCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCgggg                                                                               >  2:171000/1‑101 (MQ=255)


                         taCGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGc                                                                             >  2:2964846/1‑101 (MQ=255)


                           cGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCgg                                                                           >  2:2641984/1‑100 (MQ=255)


                                cTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                      <  2:645412/101‑1 (MQ=255)


                                cTTCAAAAGCCGCTCCCCCCGCGGGGTCGTGGATCGAAGCCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                      <  2:2153040/101‑1 (MQ=255)


                                 ttCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                     <  2:51946/101‑1 (MQ=255)


                                 ttCAAAAGTCGCTCCCCCCCCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                     <  2:1417818/101‑1 (MQ=255)


                                   cAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCgga                                                                   >  1:2043937/1‑99 (MQ=255)


                                   cAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTa                                                                   >  2:869856/1‑101 (MQ=255)


                                   cAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGGGGGTCGTa                                                                   >  2:314276/1‑101 (MQ=255)


                                       aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCg                                                               >  2:1222276/1‑101 (MQ=255)


                                         tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGt                                                             >  2:225827/1‑101 (MQ=255)


                                         tCGCCCCCCCCGGGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGt                                                             <  1:1857578/101‑1 (MQ=255)


                                           gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGc                                                           <  1:1812181/101‑1 (MQ=255)


                                           gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGc                                                           <  2:243221/101‑1 (MQ=255)


                                           gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGc                                                           >  1:3691437/1‑101 (MQ=255)


                                            cTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCa                                                          <  2:3184521/101‑1 (MQ=255)


                                             tCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCaa                                                         >  2:4077061/1‑100 (MQ=255)


                                             tCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCAt                                                         >  1:607022/1‑101 (MQ=255)


                                             tCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCAt                                                         >  2:2321990/1‑101 (MQ=255)


                                              ccccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATc                                                        >  2:4347081/1‑101 (MQ=255)


                                                ccccGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGCGCATCgg                                                      >  1:1751055/1‑101 (MQ=255)


                                                   cgcgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGAGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCgcgcc                                                   >  2:1288303/1‑97 (MQ=255)


                                                    gcgGGGGCGTGGTTCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGAATCGGAACCGGTGGATCGGccca                                                  >  2:2126204/1‑100 (MQ=38)


                                                     cgGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGa                                                 <  1:1393601/101‑1 (MQ=255)


                                                      gggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCCCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCCAt                                                >  2:2566024/1‑101 (MQ=255)


                                                       ggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATa                                               <  2:4330439/101‑1 (MQ=255)


                                                       ggggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGGGCATCGGCCCGATa                                               >  1:942610/1‑101 (MQ=255)


                                                        gggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATaa                                              <  1:1426578/101‑1 (MQ=255)


                                                        gggCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATaa                                              <  1:2834392/101‑1 (MQ=255)


                                                           cGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAAcc                                           >  2:1495909/1‑101 (MQ=255)


                                                            gTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGTGTGGATCGTAAGCGGTGCATCGGCCCGATAAAccc                                          <  2:4412047/101‑1 (MQ=255)


                                                              ggATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCg                                        <  2:3685976/101‑1 (MQ=255)


                                                              ggATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCg                                        >  1:3602489/1‑101 (MQ=255)


                                                              ggATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCg                                        >  1:4263331/1‑101 (MQ=255)


                                                               gATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGa                                       >  2:110414/1‑101 (MQ=255)


                                                                aTCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGCTAAACCCCGAt                                      >  2:539487/1‑101 (MQ=255)


                                                                aTCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAt                                      >  2:1585224/1‑101 (MQ=255)


                                                                aTCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAt                                      >  2:3550698/1‑101 (MQ=255)


                                                                  cGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAttt                                    <  2:3750057/101‑1 (MQ=255)


                                                                  cGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAttt                                    >  2:681625/1‑101 (MQ=255)


                                                                   gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt                                   >  1:4045999/1‑101 (MQ=255)


                                                                   gAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGAtttt                                   <  1:2545511/101‑1 (MQ=255)


                                                                     aaCCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCg                                 >  2:977331/1‑101 (MQ=255)


                                                                       ccgccgCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGc                               <  2:3783679/101‑1 (MQ=255)


                                                                             cgcAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGa                         >  1:2438891/1‑101 (MQ=255)


                                                                              gcAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAg                        <  1:927692/101‑1 (MQ=255)


                                                                               cAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATTGGCCCGATAAACCCCGATTTTCGGCCCCTGAgg                       >  1:3843758/1‑101 (MQ=255)


                                                                               cAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCAGATAAACCCCGATTTTCGGCCCCTGAgg                       >  2:1840099/1‑101 (MQ=255)


                                                                                aaaaaGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAggg                      >  1:4145557/1‑101 (MQ=255)


                                                                                aaaaaGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAggg                      >  1:1609491/1‑101 (MQ=255)


                                                                                  aaaGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGa                    <  2:3382127/101‑1 (MQ=255)


                                                                                       ccGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAt               <  1:2965067/101‑1 (MQ=255)


                                                                                       ccGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAt               <  1:1138987/101‑1 (MQ=255)


                                                                                       ccGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAt               >  2:1822671/1‑101 (MQ=255)


                                                                                       ccGCCAAGAAGCGGAGCAAGTCGCCCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAt               <  2:2043800/101‑1 (MQ=255)


                                                                                        cGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAtt              <  1:1272523/101‑1 (MQ=255)


                                                                                        cGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAtt              >  2:269656/1‑101 (MQ=255)


                                                                                         gCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTc             >  1:2212172/1‑101 (MQ=255)


                                                                                          ccAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCt            >  2:155670/1‑101 (MQ=255)


                                                                                          ccAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCt            >  1:1510149/1‑101 (MQ=255)


                                                                                          ccAAGAAGCGGAGCAAGTCGCGCCCCCCGCCGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCt            <  1:2164359/101‑1 (MQ=255)


                                                                                           cAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCtt           <  1:3019588/101‑1 (MQ=255)


                                                                                           cAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCtt           <  2:797053/101‑1 (MQ=255)


                                                                                           cAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGAGTCtt           >  1:2707304/1‑101 (MQ=255)


                                                                                            aagaagCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTg          >  2:3240182/1‑101 (MQ=255)


                                                                                            aagaagCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTg          >  2:2248608/1‑101 (MQ=255)


                                                                                             agaagCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTgg         >  1:1921212/1‑101 (MQ=255)


                                                                                               aagCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGca       <  2:2450103/101‑1 (MQ=255)


                                                                                                 gCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGcaca     <  1:442750/101‑1 (MQ=255)


                                                                                                 gCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGcaca     <  2:3602241/101‑1 (MQ=255)


                                                                                                    gAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAAtt  <  2:3509839/101‑1 (MQ=255)


AAACTCTATGGGAGGCTAGGGAGGCTACGCACCTTCAAAAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCCGCGCAAAAAGCCCGCCAAGAAGCGGAGCAAGTCGCTCCCCCCGCGGGGGCGTGGATCGTAAGCGGTGCATCGGCCCGATAAACCCCGATTTTCGGCCCCTGAGGGGAAAGATTCTTGGCACAATT  >  NC_014034/1397931‑1398131

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG