| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,881 | C→A | 27.4% | intergenic (+693/‑238) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,881 | 0 | C→A | 27.4% | 202.3 0.0 0.0 | 270 | intergenic (+693/‑238) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (36/38): ref base (94/100): total (131/139) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 278 total aligned reads displayed.
GCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGG > NC_014034/1395782‑1395981
|
gCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATcc > 2:4119564/1‑101 (MQ=255)
gATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.g > 1:958105/1‑101 (MQ=255)
aTCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..a < 2:3415739/101‑1 (MQ=255)
aTCGAAACCTGCGGCGTGAGTTGCCAGCGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..a < 1:445703/101‑1 (MQ=255)
gAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..Agcg < 1:1131947/101‑1 (MQ=255)
aCCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGcgcc.g < 1:860745/101‑1 (MQ=255)
tGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.gcg.c > 2:4130927/1‑101 (MQ=255)
cggcgTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.g < 1:73096/101‑1 (MQ=255)
cgTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCg < 2:3746749/101‑1 (MQ=255)
gTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.T..AGCGCC.GCG.CA.GTccc > 2:3478500/1‑99 (MQ=255)
gAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTc > 2:3878934/1‑101 (MQ=255)
tGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTccccc < 1:4399951/101‑1 (MQ=255)
ccAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCcg > 1:2870650/1‑101 (MQ=255)
ccAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCcg > 1:2757081/1‑101 (MQ=255)
cAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCcgc < 1:4181534/101‑1 (MQ=255)
aGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCcgcg < 1:4096044/101‑1 (MQ=255)
gTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCgg < 2:2606637/101‑1 (MQ=255)
gATAGACTCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCgggg < 2:217129/101‑1 (MQ=255)
gACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGt < 2:3958218/101‑1 (MQ=255)
gACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGt > 1:2010479/1‑101 (MQ=255)
gACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGt < 2:2436197/101‑1 (MQ=255)
cggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGt > 2:4322568/9‑101 (MQ=2)
ggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTg < 1:2816724/94‑1 (MQ=2)
ggcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTg < 1:191795/94‑1 (MQ=2)
caacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:2985572/9‑101 (MQ=9)
gcccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTgg < 2:1782329/95‑1 (MQ=2)
aacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1730803/94‑1 (MQ=9)
aacctatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGCCGCTCCCCCCGCGGGGGCGTGGATc > 2:3786151/8‑101 (MQ=9)
gTGGACGTCGATCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCA.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:3853260/1‑101 (MQ=255)
ccgcccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGTGCGCGCCAT.GAATTC.A...TC.G..AGCGCCATCGAGC.GTCGCTCCCCCCGCGGGGGCGTGGAt > 2:155609/6‑101 (MQ=2)
cccggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTGGa < 2:2571101/96‑1 (MQ=0)
tGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:3138718/1‑101 (MQ=255)
tatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:3016606/4‑101 (MQ=9)
tatgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:946545/98‑1 (MQ=9)
gcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:2832938/2‑101 (MQ=2)
atgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 2:3545597/3‑101 (MQ=9)
tgTCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca > 1:3175568/2‑100 (MQ=9)
ggcGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGa < 1:2137740/99‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGa < 2:1438586/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGa < 1:2207258/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGAt > 1:4003535/1‑101 (MQ=255)
tCGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAt < 2:1115217/101‑1 (MQ=9)
tCGCCCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGAt < 2:3100758/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATg < 2:3327359/101‑1 (MQ=9)
cGCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATg < 1:3603408/101‑1 (MQ=9)
cGCCCCCCCCGGGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGG...TCTGCTGGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 2:2297876/101‑2 (MQ=2)
gCTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGc > 1:2245784/1‑101 (MQ=9)
cTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCg > 1:640151/1‑101 (MQ=255)
cTCACCCCGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCg < 2:1171247/101‑1 (MQ=9)
tcaccccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCgg > 2:1848907/4‑100 (MQ=9)
tcaccccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCgg > 1:1013085/4‑100 (MQ=9)
tCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGt > 1:3704563/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt < 1:509517/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGtt < 2:727917/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCa < 2:818289/101‑1 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCa > 1:1523176/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcg > 1:1269005/1‑96 (MQ=9)
cccGCGGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcg < 2:2376764/101‑6 (MQ=9)
cccGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCAt < 2:1348696/101‑1 (MQ=255)
ccGCGGGGGCGTGGATCGAAACCCCG.CGGC.GTCCCGAAGACGGTCTTC.T..GGTGCC.GCT.GC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaccccgaac > 2:3681545/1‑92 (MQ=2)
cgggggggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATgg < 1:2455606/98‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATgg < 1:2921990/101‑1 (MQ=255)
cgcgGGGGCGTGGACCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATgg < 2:2941580/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggc < 1:2605373/101‑9 (MQ=2)
gcgGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggc > 2:2595820/1‑93 (MQ=2)
cgGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcc > 2:2244748/1‑92 (MQ=2)
cgGGGGCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcc < 1:320679/101‑10 (MQ=2)
cgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGcc > 2:805355/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGcc > 2:569951/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGcc < 2:2694760/101‑1 (MQ=255)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcct > 1:2387063/1‑91 (MQ=2)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcct < 1:3029125/101‑11 (MQ=2)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCggcgcgggcct < 1:2941047/101‑11 (MQ=2)
gggggCGTGGATCGAAACTGTG.CCGG.TTCCCGGAGACGC...TG.G..GGC.CC.TCG.CACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATCCggcgcgggcct > 2:4227241/1‑91 (MQ=2)
gggggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCt < 1:2664475/101‑1 (MQ=255)
gggggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCt > 1:2410882/1‑101 (MQ=255)
gggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTAc < 1:1103834/101‑1 (MQ=255)
gggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTAc < 2:1275696/101‑1 (MQ=255)
ggCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACg > 2:911430/1‑101 (MQ=255)
gTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCg > 1:803500/1‑101 (MQ=255)
gATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGc > 1:3282650/1‑101 (MQ=255)
cGAACCTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGt < 2:3813901/101‑1 (MQ=255)
cGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGt > 1:363687/1‑101 (MQ=255)
cGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGt < 1:3368731/101‑1 (MQ=255)
gAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCC.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTg > 1:1347094/1‑101 (MQ=255)
aaaCTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTgg < 2:2849441/101‑1 (MQ=255)
aaCTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGa < 2:3205327/101‑1 (MQ=255)
cTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACt > 2:4061802/1‑101 (MQ=255)
tGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTg < 2:2790534/101‑1 (MQ=255)
tGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGGGGACTg > 1:2085057/1‑101 (MQ=255)
gcaccgc.cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTgg > 1:2563201/4‑101 (MQ=255)
g.ccgc.cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTc < 1:1426519/101‑1 (MQ=255)
g.ccgc.cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTc < 1:1806193/101‑1 (MQ=255)
g.ccgc.cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTc < 1:1950262/101‑1 (MQ=255)
gc.cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCt < 1:123944/101‑1 (MQ=255)
c.cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTc < 1:188158/101‑1 (MQ=255)
cTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTcc < 2:4014313/101‑1 (MQ=255)
tATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTccc < 2:1523071/101‑1 (MQ=255)
gCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCcg < 2:1944918/101‑1 (MQ=255)
ccATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCcg < 2:4437812/100‑1 (MQ=255)
|
GCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCG.CCGC.CTATCGCATCCGG...TC.G..AGCGCC.GCG.CA.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGG > NC_014034/1395782‑1395981
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|