Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,797,132 2 bp→CG 100% coding (156‑157/2238 nt) RCAP_rcc01660 → signal transduction histidine kinase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,797,1320G→C100.0% 610.5 163R52R (CGG→CGC) RCAP_rcc01660signal transduction histidine kinase
Reads supporting (aligned to +/- strand):  new base (83/80):  ref base (0/0):  total (83/80)
*NC_0140341,797,1330C→G100.0% 616.1 163H53D (CAT→GAT) RCAP_rcc01660signal transduction histidine kinase
Reads supporting (aligned to +/- strand):  new base (83/80):  ref base (0/0):  total (83/80)

Only 100 of 168 total aligned reads displayed.

GAGAAGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGATACGCGGGGCCGCCTGGGTGCAGTTCGAACCGGCCGGCATGCTGGA.GG.A.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGAGG  >  NC_014034/1797037‑1797220
                                                                                               ||                                                                                          
 agaAGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTg                                                                                      >  2:4392986/1‑101 (MQ=255)
  gaAGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgg                                                                                     >  1:1916080/1‑101 (MQ=255)
  gaAGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGAAGTTCGAACGCGCCGCGATGCTgg                                                                                     >  1:3272400/1‑101 (MQ=255)
   aaGCTTCTGACCATTGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga                                                                                    >  1:1400956/1‑101 (MQ=255)
   aaGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga                                                                                    <  2:4066909/101‑1 (MQ=255)
   aaGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGACTGGGTGCAGTTCGAACGCGCCGCGATGCTgga                                                                                    >  1:3852808/1‑101 (MQ=255)
   aaGCTTCTGACCATCGTCGGCGCGCCGATCCGCCATGCCGAGGAAACCCCCGAGGCT.CCCCACCCCCCCTGGGTGCAGTTCGAACGCGCCGGGATGCTgga                                                                                    >  2:2933578/1‑101 (MQ=255)
    aGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.g                                                                                  <  1:213473/101‑1 (MQ=255)
     gCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg                                                                                 <  1:86483/101‑1 (MQ=255)
     gCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg                                                                                 >  1:2391106/1‑101 (MQ=255)
      ctccTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGTTgga.gg.a                                                                               <  2:2046881/98‑1 (MQ=255)
      cTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg.a                                                                               >  1:1975036/1‑101 (MQ=255)
        tCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg.aac                                                                             >  1:3483883/1‑99 (MQ=255)
         cTGACCATCGTCGGCACGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg.aaca                                                                            <  2:3320154/101‑4 (MQ=255)
          tGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg.aacag                                                                           >  2:3692171/1‑97 (MQ=255)
          tGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg.aacag                                                                           >  2:2540496/1‑97 (MQ=255)
          tGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTgga.gg.aacag                                                                           <  2:3764074/101‑5 (MQ=255)
            aCCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGt                                                                         >  1:364504/1‑101 (MQ=255)
             ccATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTc                                                                        <  2:1295152/101‑1 (MQ=255)
              cATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTcc                                                                       <  1:3779603/101‑1 (MQ=255)
              cATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTcc                                                                       >  1:939622/1‑101 (MQ=255)
              cATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTcc                                                                       <  1:1127022/101‑1 (MQ=255)
               aTCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCcg                                                                      <  1:637462/101‑1 (MQ=255)
                tcgtcgGCGCGCTGAGCCGCCATGCCGAGTAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCcgc                                                                     <  2:1537719/101‑1 (MQ=255)
                tcgtcgGCGCGCTGACCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCcgc                                                                     <  2:403228/101‑1 (MQ=255)
                  gtcgGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGa                                                                   >  2:3076101/1‑101 (MQ=255)
                  gtcgGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGa                                                                   >  1:1243791/1‑101 (MQ=255)
                  gtcgGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGa                                                                   >  1:2635065/1‑101 (MQ=255)
                  gtcgGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGa                                                                   <  2:4001369/101‑1 (MQ=255)
                        gcgcTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCAc                                                             >  2:4322000/1‑101 (MQ=255)
                        gcgcTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCAc                                                             >  1:2726472/1‑101 (MQ=255)
                        gcgcTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCAc                                                             >  2:1193576/1‑101 (MQ=255)
                          gcTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCAccc                                                           >  1:2738780/1‑101 (MQ=255)
                          gcTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCAccc                                                           <  1:3692424/101‑1 (MQ=255)
                          gcTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCAccc                                                           <  2:3844934/101‑1 (MQ=255)
                           cTGATCCGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCcg                                                          >  2:4380618/1‑101 (MQ=255)
                                 cGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCt                                                    <  2:805500/101‑1 (MQ=255)
                                 cGCCATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCt                                                    >  2:3572580/1‑101 (MQ=255)
                                   ccATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCTCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTgg                                                  <  2:2270069/101‑1 (MQ=255)
                                    cATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGa                                                 <  2:3192407/101‑1 (MQ=255)
                                    cATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGa                                                 >  1:1617272/1‑101 (MQ=255)
                                    cATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGa                                                 <  2:2934367/101‑1 (MQ=255)
                                    cATGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGa                                                 >  1:384103/1‑101 (MQ=255)
                                     aTGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGaa                                                <  2:1864125/101‑1 (MQ=255)
                                      tGCCGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAAc                                               <  1:95256/101‑1 (MQ=255)
                                        ccGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACgg                                             >  1:3201649/1‑101 (MQ=255)
                                        ccGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACgg                                             <  2:1513336/101‑1 (MQ=255)
                                        ccGAGGAAACCCCCGAGGAT.CGAGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GG.AGCAGGTCCGCGACCGCACCCGCGATCTGGAACgg                                             >  1:1162563/1‑101 (MQ=255)
                                         cGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACggg                                            >  1:1849921/1‑101 (MQ=255)
                                         cGAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACggg                                            >  2:3453700/1‑101 (MQ=255)
                                          gAGGAAACCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGgc                                           <  2:1253846/101‑1 (MQ=255)
                                               aaCCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGCTGCTGGAGGG.A.CAGGTCCGCGACCGCACCCGCGAACTGGAACGGGCGCTCg                                      >  1:2992516/1‑101 (MQ=255)
                                               aaCCCCCGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCg                                      >  1:2177697/1‑101 (MQ=255)
                                                 cccccGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGAt                                    <  1:271368/101‑1 (MQ=255)
                                                  ccccGACGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATc                                   <  2:616611/101‑1 (MQ=255)
                                                   cccGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACTGCACCCGCGATCTGGAACGGGCGCTCGATCt                                  >  1:1548387/1‑101 (MQ=255)
                                                   cccGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCt                                  <  2:3634666/101‑1 (MQ=255)
                                                   cccGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCt                                  <  1:3122517/101‑1 (MQ=255)
                                                    ccGAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTg                                 <  2:1381715/101‑1 (MQ=255)
                                                      gAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCt                               >  1:794858/1‑101 (MQ=255)
                                                      gAGGAT.CGCGGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCt                               >  2:915853/1‑101 (MQ=255)
                                                        aggatcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTc                              >  2:279940/6‑101 (MQ=255)
                                                        aggatcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTc                              >  1:4281560/6‑101 (MQ=255)
                                                         ggatcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCa                             >  1:2504013/5‑101 (MQ=255)
                                                         ggagcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCa                             <  2:1925816/97‑1 (MQ=255)
                                                          gatcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCaa                            <  2:3933179/98‑1 (MQ=255)
                                                          gatcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCaa                            <  2:3057409/98‑1 (MQ=255)
                                                           atcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAAt                           <  1:1494924/99‑1 (MQ=255)
                                                            tcgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATg                          <  1:4433642/100‑1 (MQ=255)
                                                             cgcgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGc                         <  2:2390956/101‑1 (MQ=255)
                                                               cgGCGCCGCCTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCt                       >  2:349111/1‑101 (MQ=255)
                                                                ggcgccgccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTc                      <  2:1400849/98‑1 (MQ=255)
                                                                ggcgccgccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTc                      <  1:155634/98‑1 (MQ=255)
                                                                 gcgccgccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCg                     <  2:1099769/99‑1 (MQ=255)
                                                                  cgccgccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGa                    >  2:1162079/2‑101 (MQ=255)
                                                                    ccgccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAAt                  <  2:2737315/101‑1 (MQ=255)
                                                                      gccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATgc                >  2:1815181/1‑101 (MQ=255)
                                                                      gccTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATgc                <  2:3542828/101‑1 (MQ=255)
                                                                        cTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATgcgc              >  1:1954287/1‑101 (MQ=255)
                                                                        cTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATgcgc              >  1:1955556/1‑101 (MQ=255)
                                                                        cTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATgcgc              <  1:3149567/101‑1 (MQ=255)
                                                                        cTGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGAACGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATgcgc              >  1:4267230/1‑101 (MQ=255)
                                                                         tGGGTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGcgcg             <  2:2859949/101‑1 (MQ=255)
                                                                           ggTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGc           >  2:1107374/1‑101 (MQ=255)
                                                                           ggTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGc           <  2:1016687/101‑1 (MQ=255)
                                                                            gTGCAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCt          <  1:4322269/101‑1 (MQ=255)
                                                                             tGCAGTTCGAACGCGCCGCGATGCCGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTg         >  2:153189/1‑101 (MQ=255)
                                                                               cAGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGc       >  1:4341146/1‑101 (MQ=255)
                                                                                aGTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGcc      <  2:959681/101‑1 (MQ=255)
                                                                                 gTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCg     <  1:3572828/101‑1 (MQ=255)
                                                                                 gTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCg     >  2:3458910/1‑101 (MQ=255)
                                                                                 gTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCg     <  2:836556/101‑1 (MQ=255)
                                                                                 gTTCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCg     >  2:2965894/1‑101 (MQ=255)
                                                                                  ttCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGGGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGAGCGGCTGGCCgg    >  1:1409274/1‑100 (MQ=255)
                                                                                  ttCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGa    <  2:4281291/101‑1 (MQ=255)
                                                                                  ttCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGa    <  1:3453940/101‑1 (MQ=255)
                                                                                  ttCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGa    <  1:995465/101‑1 (MQ=255)
                                                                                  ttCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGAGATCTGGAAAGGGCGATCGATCTGCTCAATGCCTCGAATGCGCGGCTGGGCGa    >  1:409164/1‑101 (MQ=255)
                                                                                   tCGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGAg   >  1:1878540/1‑101 (MQ=255)
                                                                                    cGAACGCGCCGCGATGCTGGA.GGAA.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGAgg  <  1:4246630/101‑1 (MQ=255)
                                                                                               ||                                                                                          
GAGAAGCTTCTGACCATCGTCGGCGCGCTGATCCGCCATGCCGAGGAAACCCCCGAGGATACGCGGGGCCGCCTGGGTGCAGTTCGAACCGGCCGGCATGCTGGA.GG.A.CAGGTCCGCGACCGCACCCGCGATCTGGAACGGGCGCTCGATCTGCTCAATGCCTCGAATGCGCGGCTGGCCGAGG  >  NC_014034/1797037‑1797220

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG