Regulatory Modules
Displaying 131 - 140 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0163 | 1300 | 21000 | 0.40 | DVU0506, DVU1246, DVU1292, DVU1682, DVU1843, DVU2371, DVU3070, DVUA0006, DVUA0068, DVUA0076, DVU2051, DVU2372, DVU3088 | DNA recombination, DNA metabolic process, hydrolase activity, acting on carbon-nit..., hydrolase activity, acting on carbon-nit... |
bicluster_0019 | 1400 | 17000 | 0.44 | DVU0367, DVU0444, DVU0486, DVU0609, DVU0892, DVU1884, DVU1982, DVU2828, DVU3152, DVU3169, DVU3354, DVU0447, DVU0964, DVU1962 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
bicluster_0119 | 1600 | 13000 | 0.49 | DVU0093, DVU0359, DVU0380, DVU0418, DVU1467, DVU1722, DVU2420, DVU2486, DVU2554, DVU2555, DVU2641, DVU2658, DVU2659, DVU2667, DVU0146, DVU0159, DVU0160, DVU0243, DVU0319, DVU0417, DVU0831, DVU1192, DVU2258, DVU2752, DVU2876 | DNA recombination, antiporter activity, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., carbohydrate binding |
bicluster_0218 | 1600 | 11000 | 0.35 | DVU0825, DVU0663, DVU0665, DVU0811, DVU0812, DVU0857, DVU0994, DVU1468, DVU1976, DVU1977, DVU2078, DVU2079, DVU2643 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., sulfur compound metabolic process, sulfur compound biosynthetic process |
bicluster_0295 | 1600 | 6800 | 0.40 | DVU0538, DVU1233, DVU3248, DVU0083, DVU0115, DVU1265, DVU1761, DVU2167, DVU2432, DVU2631, DVU2637, DVU2663, DVU2754, DVU2777, DVU3249 | transferase activity, transferring phosp..., [protein-PII] uridylyltransferase activi..., oxidoreductase activity, acting on NAD(P..., oxidoreductase activity, acting on NAD(P..., uridylyltransferase activity |
bicluster_0039 | 1700 | 3000 | 0.35 | DVU0008, DVU1164, DVU1754, DVU1967, DVU1968, DVU2191, DVU2194, DVU2278, DVU2480, DVU2690, DVU2691 | hydrolase activity, acting on carbon-nit..., hydrolase activity, acting on carbon-nit... |
bicluster_0041 | 1700 | 11000 | 0.35 | DVU0115, DVU0366, DVU1735, DVU2578, DVU2614, DVU2701, DVU2860, DVU3139, DVU0081, DVU2865 | NADP binding, ligase activity, forming carbon-nitrogen..., ligase activity |
bicluster_0189 | 1700 | 3200 | 0.34 | DVU0533, DVU0534, DVU0588, DVU0596, DVU0597, DVU2294, DVU0529, DVU0530, DVU0531, DVU0532, DVU0535, DVU0536, DVU0586, DVU0598, DVU0599 | response to extracellular stimulus, cellular response to extracellular stimu..., cellular response to external stimulus, cell wall organization or biogenesis, cellular response to stress |
bicluster_0024 | 1700 | 11000 | 0.38 | DVU1106, DVU1114, DVU1116, DVU1118, DVU1120, DVU1125, DVU1130, DVU1132, DVU1133, DVU1135, DVU1137, DVU1138, DVU1140, DVU1143 | DNA binding, nucleic acid binding |
bicluster_0201 | 1900 | 10000 | 0.50 | DVU0655, DVU1437, DVU3213, DVUA0097, DVU0069, DVU0256, DVU0396, DVU0803, DVU0963, DVU1030, DVU1410, DVU1438, DVU2005, DVU2547, DVU2549, DVU2550, DVU2894, DVU3337 | cytoplasm, binding, organic cyclic compound binding, heterocyclic compound binding |